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The following term was not found in PubMed: Morarech
Page 1
Binding MOAD, a high-quality protein-ligand database.
Benson ML, Smith RD, Khazanov NA, Dimcheff B, Beaver J, Dresslar P, Nerothin J, Carlson HA. Benson ML, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D674-8. doi: 10.1093/nar/gkm911. Epub 2007 Nov 30. Nucleic Acids Res. 2008. PMID: 18055497 Free PMC article.
Binding MOAD (Mother of All Databases) is a database of 9836 protein-ligand crystal structures. ...Ligands have additional chemical data, allowing for cheminformatics mining. Lastly, logins are no longer necessary, and Binding MOAD is freely available to all at http …
Binding MOAD (Mother of All Databases) is a database of 9836 protein-ligand crystal structures. ...Ligands have additional chemical d …
Cleavage of molybdopterin synthase MoaD-MoaE linear fusion by JAMM/MPN(+) domain containing metalloprotease DR0402 from Deinococcus radiodurans.
Yang YM, Won YB, Ji CJ, Kim JH, Ryu SH, Ok YH, Lee JW. Yang YM, et al. Biochem Biophys Res Commun. 2018 Jul 7;502(1):48-54. doi: 10.1016/j.bbrc.2018.05.117. Epub 2018 May 19. Biochem Biophys Res Commun. 2018. PMID: 29777693
Despite the importance of free C terminal di-Gly motif of MoaD as a sulfur carrier, some bacteria encode a fused MPT synthase in which MoaD- and MoaE-like domains are located on a single peptide. ...Furthermore, JAMM(DR) can also cleave off the MoaD from M …
Despite the importance of free C terminal di-Gly motif of MoaD as a sulfur carrier, some bacteria encode a fused MPT synthase in whic …
Updates to Binding MOAD (Mother of All Databases): Polypharmacology Tools and Their Utility in Drug Repurposing.
Smith RD, Clark JJ, Ahmed A, Orban ZJ, Dunbar JB Jr, Carlson HA. Smith RD, et al. J Mol Biol. 2019 Jun 14;431(13):2423-2433. doi: 10.1016/j.jmb.2019.05.024. Epub 2019 May 22. J Mol Biol. 2019. PMID: 31125569 Free PMC article.
The goal of Binding MOAD is to provide users with a data set focused on high-quality x-ray crystal structures that have been solved with biologically relevant ligands bound. ...The large amount of protein-ligand information available in Binding MOAD allows us to com …
The goal of Binding MOAD is to provide users with a data set focused on high-quality x-ray crystal structures that have been solved w …
Binding MOAD (Mother Of All Databases).
Hu L, Benson ML, Smith RD, Lerner MG, Carlson HA. Hu L, et al. Proteins. 2005 Aug 15;60(3):333-40. doi: 10.1002/prot.20512. Proteins. 2005. PMID: 15971202 Free article.
Binding MOAD (Mother of All Databases) is the largest collection of high-quality, protein-ligand complexes available from the Protein Data Bank. At this time, Binding MOAD contains 5331 protein-ligand complexes comprised of 1780 unique protein families and 2630 uniq …
Binding MOAD (Mother of All Databases) is the largest collection of high-quality, protein-ligand complexes available from the Protein …
Friable scalp nodule.
Buck S, Naqvi J, Moad J, Donnelly H. Buck S, et al. Cutis. 2020 Jan;105(1):E19-E21. Cutis. 2020. PMID: 32074160 No abstract available.
Sunsetting Binding MOAD with its last data update and the addition of 3D-ligand polypharmacology tools.
Wagle S, Smith RD, Dominic AJ 3rd, DasGupta D, Tripathi SK, Carlson HA. Wagle S, et al. Sci Rep. 2023 Feb 21;13(1):3008. doi: 10.1038/s41598-023-29996-w. Sci Rep. 2023. PMID: 36810894 Free PMC article.
Binding MOAD is a database of protein-ligand complexes and their affinities with many structured relationships across the dataset. ...
Binding MOAD is a database of protein-ligand complexes and their affinities with many structured relationships across the dataset. .. …
Recent improvements to Binding MOAD: a resource for protein-ligand binding affinities and structures.
Ahmed A, Smith RD, Clark JJ, Dunbar JB Jr, Carlson HA. Ahmed A, et al. Nucleic Acids Res. 2015 Jan;43(Database issue):D465-9. doi: 10.1093/nar/gku1088. Epub 2014 Nov 6. Nucleic Acids Res. 2015. PMID: 25378330 Free PMC article.
Binding MOAD has grown at the rate of 1994 complexes per year, on average. ...In order to remove redundancy, Binding MOAD records are clustered in different families based on 90% sequence identity. ...
Binding MOAD has grown at the rate of 1994 complexes per year, on average. ...In order to remove redundancy, Binding MOAD reco …
Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex.
Lake MW, Wuebbens MM, Rajagopalan KV, Schindelin H. Lake MW, et al. Nature. 2001 Nov 15;414(6861):325-9. doi: 10.1038/35104586. Nature. 2001. PMID: 11713534
Similar to the E1 enzymes, MoeB activates the C terminus of MoaD to form an acyl-adenylate. Subsequently, a sulphurtransferase converts the MoaD acyl-adenylate to a thiocarboxylate that acts as the sulphur donor during Moco biosynthesis. These findings suggest that …
Similar to the E1 enzymes, MoeB activates the C terminus of MoaD to form an acyl-adenylate. Subsequently, a sulphurtransferase conver …
Ubiquitin-like prokaryotic MoaD as a fusion tag for expression of heterologous proteins in Escherichia coli.
Yuan S, Wang X, Xu J, Yan Z, Wang N. Yuan S, et al. BMC Biotechnol. 2014 Jan 21;14:5. doi: 10.1186/1472-6750-14-5. BMC Biotechnol. 2014. PMID: 24444081 Free PMC article.
RESULTS: Fusion of MoaD to either end of EGFP enhanced the expression yield of EGFP with a similar efficacy of ThiS. ...CONCLUSIONS: Prokaryotic ubiquitin-like protein MoaD can act as a fusion tag to promote the fusion expression with varying mechanisms, which enric …
RESULTS: Fusion of MoaD to either end of EGFP enhanced the expression yield of EGFP with a similar efficacy of ThiS. ...CONCLUSIONS: …
Electrostatic Potential Energy in Protein-Drug Complexes.
Bitencourt-Ferreira G, de Azevedo Junior WF. Bitencourt-Ferreira G, et al. Curr Med Chem. 2021;28(24):4954-4971. doi: 10.2174/0929867328666210201150842. Curr Med Chem. 2021. PMID: 33593246 Review.
We focus our attention on electrostatic interactions and how to explore recently published results to increase the predictive performance of the computational models to estimate the energetics of protein- drug interactions. Public data available at Binding MOAD, BindingDB, …
We focus our attention on electrostatic interactions and how to explore recently published results to increase the predictive performance of …
169 results