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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2002 2
2004 1
2005 5
2006 3
2007 4
2008 4
2011 4
2013 3
2014 5
2015 1
2016 4
2017 9
2018 11
2019 8
2020 8
2021 6
2022 6
2023 3
2024 2

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80 results

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Page 1
Identification and Quantification of Proteoforms by Mass Spectrometry.
Schaffer LV, Millikin RJ, Miller RM, Anderson LC, Fellers RT, Ge Y, Kelleher NL, LeDuc RD, Liu X, Payne SH, Sun L, Thomas PM, Tucholski T, Wang Z, Wu S, Wu Z, Yu D, Shortreed MR, Smith LM. Schaffer LV, et al. Among authors: shortreed mr. Proteomics. 2019 May;19(10):e1800361. doi: 10.1002/pmic.201800361. Proteomics. 2019. PMID: 31050378 Free PMC article. Review.
Enhanced Proteomic Data Analysis with MetaMorpheus.
Miller RM, Millikin RJ, Rolfs Z, Shortreed MR, Smith LM. Miller RM, et al. Among authors: shortreed mr. Methods Mol Biol. 2023;2426:35-66. doi: 10.1007/978-1-0716-1967-4_3. Methods Mol Biol. 2023. PMID: 36308684 Free PMC article.
Spritz: A Proteogenomic Database Engine.
Cesnik AJ, Miller RM, Ibrahim K, Lu L, Millikin RJ, Shortreed MR, Frey BL, Smith LM. Cesnik AJ, et al. Among authors: shortreed mr. J Proteome Res. 2021 Apr 2;20(4):1826-1834. doi: 10.1021/acs.jproteome.0c00407. Epub 2020 Oct 7. J Proteome Res. 2021. PMID: 32967423 Free PMC article.
Global Post-Translational Modification Discovery.
Li Q, Shortreed MR, Wenger CD, Frey BL, Schaffer LV, Scalf M, Smith LM. Li Q, et al. Among authors: shortreed mr. J Proteome Res. 2017 Apr 7;16(4):1383-1390. doi: 10.1021/acs.jproteome.6b00034. Epub 2017 Mar 1. J Proteome Res. 2017. PMID: 28248113 Free PMC article.
ProForma: A Standard Proteoform Notation.
LeDuc RD, Schwämmle V, Shortreed MR, Cesnik AJ, Solntsev SK, Shaw JB, Martin MJ, Vizcaino JA, Alpi E, Danis P, Kelleher NL, Smith LM, Ge Y, Agar JN, Chamot-Rooke J, Loo JA, Pasa-Tolic L, Tsybin YO. LeDuc RD, et al. Among authors: shortreed mr. J Proteome Res. 2018 Mar 2;17(3):1321-1325. doi: 10.1021/acs.jproteome.7b00851. Epub 2018 Feb 14. J Proteome Res. 2018. PMID: 29397739 Free PMC article.
Enhanced protein isoform characterization through long-read proteogenomics.
Miller RM, Jordan BT, Mehlferber MM, Jeffery ED, Chatzipantsiou C, Kaur S, Millikin RJ, Dai Y, Tiberi S, Castaldi PJ, Shortreed MR, Luckey CJ, Conesa A, Smith LM, Deslattes Mays A, Sheynkman GM. Miller RM, et al. Among authors: shortreed mr. Genome Biol. 2022 Mar 3;23(1):69. doi: 10.1186/s13059-022-02624-y. Genome Biol. 2022. PMID: 35241129 Free PMC article.
Ultrafast Peptide Label-Free Quantification with FlashLFQ.
Millikin RJ, Solntsev SK, Shortreed MR, Smith LM. Millikin RJ, et al. Among authors: shortreed mr. J Proteome Res. 2018 Jan 5;17(1):386-391. doi: 10.1021/acs.jproteome.7b00608. Epub 2017 Nov 8. J Proteome Res. 2018. PMID: 29083185 Free PMC article.
Advanced methods for the analysis of chromatin-associated proteins.
Guillen-Ahlers H, Shortreed MR, Smith LM, Olivier M. Guillen-Ahlers H, et al. Among authors: shortreed mr. Physiol Genomics. 2014 Jul 1;46(13):441-7. doi: 10.1152/physiolgenomics.00041.2014. Epub 2014 May 6. Physiol Genomics. 2014. PMID: 24803678 Free PMC article. Review.
A five-level classification system for proteoform identifications.
Smith LM, Thomas PM, Shortreed MR, Schaffer LV, Fellers RT, LeDuc RD, Tucholski T, Ge Y, Agar JN, Anderson LC, Chamot-Rooke J, Gault J, Loo JA, Paša-Tolić L, Robinson CV, Schlüter H, Tsybin YO, Vilaseca M, Vizcaíno JA, Danis PO, Kelleher NL. Smith LM, et al. Among authors: shortreed mr. Nat Methods. 2019 Oct;16(10):939-940. doi: 10.1038/s41592-019-0573-x. Nat Methods. 2019. PMID: 31451767 Free PMC article. No abstract available.
80 results