Supermodeling in predictive diagnostics of cancer under treatment

Comput Biol Med. 2021 Oct:137:104797. doi: 10.1016/j.compbiomed.2021.104797. Epub 2021 Aug 28.

Abstract

Classical data assimilation (DA) techniques, synchronizing a computer model with observations, are highly demanding computationally, particularly, for complex over-parametrized cancer models. Consequently, current models are not sufficiently flexible to interactively explore various therapy strategies, and to become a key tool of predictive oncology. We show that, by using supermodeling, it is possible to develop a prediction/correction scheme that could attain the required time regimes and be directly used to support decision-making in anticancer therapies. A supermodel is an interconnected ensemble of individual models (sub-models); in this case, the variously parametrized baseline tumor models. The sub-model connection weights are trained from data, thereby incorporating the advantages of the individual models. Simultaneously, by optimizing the strengths of the connections, the sub-models tend to partially synchronize with one another. As a result, during the evolution of the supermodel, the systematic errors of the individual models partially cancel each other. We find that supermodeling allows for a radical increase in the accuracy and efficiency of data assimilation. We demonstrate that it can be considered as a meta-procedure for any classical parameter fitting algorithm, thus it represents the next - latent - level of abstraction of data assimilation. We conclude that supermodeling is a very promising paradigm that can considerably increase the quality of prognosis in predictive oncology.

Keywords: Anticancer therapy; Cancer predictive system; Data assimilation; Efficient tumor model; Supermodeling.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Humans
  • Models, Theoretical*
  • Neoplasms* / diagnosis
  • Neoplasms* / therapy