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FEAST: fast expectation-maximization for microbial source tracking.
Shenhav L, Thompson M, Joseph TA, Briscoe L, Furman O, Bogumil D, Mizrahi I, Pe'er I, Halperin E. Shenhav L, et al. Among authors: briscoe l. Nat Methods. 2019 Jul;16(7):627-632. doi: 10.1038/s41592-019-0431-x. Epub 2019 Jun 10. Nat Methods. 2019. PMID: 31182859 Free PMC article.
Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae.
Estrada-de Los Santos P, Palmer M, Chávez-Ramírez B, Beukes C, Steenkamp ET, Briscoe L, Khan N, Maluk M, Lafos M, Humm E, Arrabit M, Crook M, Gross E, Simon MF, Dos Reis Junior FB, Whitman WB, Shapiro N, Poole PS, Hirsch AM, Venter SN, James EK. Estrada-de Los Santos P, et al. Among authors: briscoe l. Genes (Basel). 2018 Aug 1;9(8):389. doi: 10.3390/genes9080389. Genes (Basel). 2018. PMID: 30071618 Free PMC article.
Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.
De Meyer SE, Briscoe L, Martínez-Hidalgo P, Agapakis CM, de-Los Santos PE, Seshadri R, Reeve W, Weinstock G, O'Hara G, Howieson JG, Hirsch AM. De Meyer SE, et al. Among authors: briscoe l. Mol Plant Microbe Interact. 2016 Aug;29(8):609-19. doi: 10.1094/MPMI-05-16-0091-R. Epub 2016 Jun 30. Mol Plant Microbe Interact. 2016. PMID: 27269511 Free article.