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Web Services for RNA-RNA Interaction Prediction.
Fukunaga T, Iwakiri J, Hamada M. Fukunaga T, et al. Among authors: iwakiri j. Methods Mol Biol. 2023;2586:175-195. doi: 10.1007/978-1-0716-2768-6_11. Methods Mol Biol. 2023. PMID: 36705905 Review.
DDX41 coordinates RNA splicing and transcriptional elongation to prevent DNA replication stress in hematopoietic cells.
Shinriki S, Hirayama M, Nagamachi A, Yokoyama A, Kawamura T, Kanai A, Kawai H, Iwakiri J, Liu R, Maeshiro M, Tungalag S, Tasaki M, Ueda M, Tomizawa K, Kataoka N, Ideue T, Suzuki Y, Asai K, Tani T, Inaba T, Matsui H. Shinriki S, et al. Among authors: iwakiri j. Leukemia. 2022 Nov;36(11):2605-2620. doi: 10.1038/s41375-022-01708-9. Epub 2022 Oct 14. Leukemia. 2022. PMID: 36229594 Free PMC article.
Bioinformatics tools for lncRNA research.
Iwakiri J, Hamada M, Asai K. Iwakiri J, et al. Biochim Biophys Acta. 2016 Jan;1859(1):23-30. doi: 10.1016/j.bbagrm.2015.07.014. Epub 2015 Aug 10. Biochim Biophys Acta. 2016. PMID: 26271403 Review.
Extended ensemble simulations of a SARS-CoV-2 nsp1-5'-UTR complex.
Sakuraba S, Xie Q, Kasahara K, Iwakiri J, Kono H. Sakuraba S, et al. Among authors: iwakiri j. PLoS Comput Biol. 2022 Jan 19;18(1):e1009804. doi: 10.1371/journal.pcbi.1009804. eCollection 2022 Jan. PLoS Comput Biol. 2022. PMID: 35045069 Free PMC article.
m6 A modification of HSATIII lncRNAs regulates temperature-dependent splicing.
Ninomiya K, Iwakiri J, Aly MK, Sakaguchi Y, Adachi S, Natsume T, Terai G, Asai K, Suzuki T, Hirose T. Ninomiya K, et al. Among authors: iwakiri j. EMBO J. 2021 Aug 2;40(15):e107976. doi: 10.15252/embj.2021107976. Epub 2021 Jun 29. EMBO J. 2021. PMID: 34184765 Free PMC article.
21 results