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2019 2
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Page 1
Mass spectrometry-based draft of the mouse proteome.
Giansanti P, Samaras P, Bian Y, Meng C, Coluccio A, Frejno M, Jakubowsky H, Dobiasch S, Hazarika RR, Rechenberger J, Calzada-Wack J, Krumm J, Mueller S, Lee CY, Wimberger N, Lautenbacher L, Hassan Z, Chang YC, Falcomatà C, Bayer FP, Bärthel S, Schmidt T, Rad R, Combs SE, The M, Johannes F, Saur D, de Angelis MH, Wilhelm M, Schneider G, Kuster B. Giansanti P, et al. Among authors: rechenberger j. Nat Methods. 2022 Jul;19(7):803-811. doi: 10.1038/s41592-022-01526-y. Epub 2022 Jun 16. Nat Methods. 2022. PMID: 35710609 Free PMC article.
Selective multi-kinase inhibition sensitizes mesenchymal pancreatic cancer to immune checkpoint blockade by remodeling the tumor microenvironment.
Falcomatà C, Bärthel S, Widholz SA, Schneeweis C, Montero JJ, Toska A, Mir J, Kaltenbacher T, Heetmeyer J, Swietlik JJ, Cheng JY, Teodorescu B, Reichert O, Schmitt C, Grabichler K, Coluccio A, Boniolo F, Veltkamp C, Zukowska M, Vargas AA, Paik WH, Jesinghaus M, Steiger K, Maresch R, Öllinger R, Ammon T, Baranov O, Robles MS, Rechenberger J, Kuster B, Meissner F, Reichert M, Flossdorf M, Rad R, Schmidt-Supprian M, Schneider G, Saur D. Falcomatà C, et al. Among authors: rechenberger j. Nat Cancer. 2022 Mar;3(3):318-336. doi: 10.1038/s43018-021-00326-1. Epub 2022 Jan 31. Nat Cancer. 2022. PMID: 35122074 Free PMC article.
Lactobacillus supports Clostridiales to restrict gut colonization by multidrug-resistant Enterobacteriaceae.
Djukovic A, Garzón MJ, Canlet C, Cabral V, Lalaoui R, García-Garcerá M, Rechenberger J, Tremblay-Franco M, Peñaranda I, Puchades-Carrasco L, Pineda-Lucena A, González-Barberá EM, Salavert M, López-Hontangas JL, Sanz MÁ, Sanz J, Kuster B, Rolain JM, Debrauwer L, Xavier KB, Xavier JB, Ubeda C. Djukovic A, et al. Among authors: rechenberger j. Nat Commun. 2022 Sep 24;13(1):5617. doi: 10.1038/s41467-022-33313-w. Nat Commun. 2022. PMID: 36153315 Free PMC article.
Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning.
Gessulat S, Schmidt T, Zolg DP, Samaras P, Schnatbaum K, Zerweck J, Knaute T, Rechenberger J, Delanghe B, Huhmer A, Reimer U, Ehrlich HC, Aiche S, Kuster B, Wilhelm M. Gessulat S, et al. Among authors: rechenberger j. Nat Methods. 2019 Jun;16(6):509-518. doi: 10.1038/s41592-019-0426-7. Epub 2019 May 27. Nat Methods. 2019. PMID: 31133760
Challenges in Clinical Metaproteomics Highlighted by the Analysis of Acute Leukemia Patients with Gut Colonization by Multidrug-Resistant Enterobacteriaceae.
Rechenberger J, Samaras P, Jarzab A, Behr J, Frejno M, Djukovic A, Sanz J, González-Barberá EM, Salavert M, López-Hontangas JL, Xavier KB, Debrauwer L, Rolain JM, Sanz M, Garcia-Garcera M, Wilhelm M, Ubeda C, Kuster B. Rechenberger J, et al. Proteomes. 2019 Jan 8;7(1):2. doi: 10.3390/proteomes7010002. Proteomes. 2019. PMID: 30626002 Free PMC article.