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A Primer on the Analysis of High-Throughput Sequencing Data for Detection of Plant Viruses.
Kutnjak D, Tamisier L, Adams I, Boonham N, Candresse T, Chiumenti M, De Jonghe K, Kreuze JF, Lefebvre M, Silva G, Malapi-Wight M, Margaria P, Mavrič Pleško I, McGreig S, Miozzi L, Remenant B, Reynard JS, Rollin J, Rott M, Schumpp O, Massart S, Haegeman A. Kutnjak D, et al. Among authors: reynard js. Microorganisms. 2021 Apr 14;9(4):841. doi: 10.3390/microorganisms9040841. Microorganisms. 2021. PMID: 33920047 Free PMC article. Review.
Molecular Characterization of Divergent Closterovirus Isolates Infecting Ribes Species.
Koloniuk I, Thekke-Veetil T, Reynard JS, Mavrič Pleško I, Přibylová J, Brodard J, Kellenberger I, Sarkisova T, Špak J, Lamovšek J, Massart S, Ho T, Postman JD, Tzanetakis IE. Koloniuk I, et al. Among authors: reynard js. Viruses. 2018 Jul 12;10(7):369. doi: 10.3390/v10070369. Viruses. 2018. PMID: 30002359 Free PMC article.
Looking beyond Virus Detection in RNA Sequencing Data: Lessons Learned from a Community-Based Effort to Detect Cellular Plant Pathogens and Pests.
Haegeman A, Foucart Y, De Jonghe K, Goedefroit T, Al Rwahnih M, Boonham N, Candresse T, Gaafar YZA, Hurtado-Gonzales OP, Kogej Zwitter Z, Kutnjak D, Lamovšek J, Lefebvre M, Malapi M, Mavrič Pleško I, Önder S, Reynard JS, Salavert Pamblanco F, Schumpp O, Stevens K, Pal C, Tamisier L, Ulubaş Serçe Ç, van Duivenbode I, Waite DW, Hu X, Ziebell H, Massart S. Haegeman A, et al. Among authors: reynard js. Plants (Basel). 2023 May 29;12(11):2139. doi: 10.3390/plants12112139. Plants (Basel). 2023. PMID: 37299118 Free PMC article.
Virus Detection by High-Throughput Sequencing of Small RNAs: Large-Scale Performance Testing of Sequence Analysis Strategies.
Massart S, Chiumenti M, De Jonghe K, Glover R, Haegeman A, Koloniuk I, Komínek P, Kreuze J, Kutnjak D, Lotos L, Maclot F, Maliogka V, Maree HJ, Olivier T, Olmos A, Pooggin MM, Reynard JS, Ruiz-García AB, Safarova D, Schneeberger PHH, Sela N, Turco S, Vainio EJ, Varallyay E, Verdin E, Westenberg M, Brostaux Y, Candresse T. Massart S, et al. Among authors: reynard js. Phytopathology. 2019 Mar;109(3):488-497. doi: 10.1094/PHYTO-02-18-0067-R. Epub 2019 Feb 7. Phytopathology. 2019. PMID: 30070618 Free article.
15 results