Discriminating larvae of two syntopic Cychramus species (Coleoptera, Nitidulidae) by means of bar-HRM analysis

Mol Biol Rep. 2020 Oct;47(10):8251-8257. doi: 10.1007/s11033-020-05786-9. Epub 2020 Sep 8.

Abstract

Molecular genetic methods are increasingly used to supplement or substitute classical morphology-based species identification. Here, we employ a COI mini-barcode coupled high-resolution melting analysis to quickly, cost-efficiently and reliably determine larvae of two closely related Cychramus (Coleoptera, Nitidulidae) species. Euclidean distance comparison (p < 0.01) and a Welch t-test of the melting point temperatures (p < 0.01) provide highly significant statistical evidence for species specific differences in melting and fluorescence curves, thus allowing the assignment of larvae to either of the two species. This protocol serves as a fast, low-cost and low-tech method to discriminate between pairs or groups of closely related species and can be adapted and applied to various ecological research questions.

Keywords: Coleoptera; DNA-barcoding; High-resolution melting analysis; Larvae; Mini-barcodes; Sap beetles.

MeSH terms

  • Animals
  • Coleoptera / genetics*
  • DNA Barcoding, Taxonomic*
  • Larva / genetics
  • Species Specificity