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2016 1
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2020 6
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Page 1
Long noncoding RNA expression profiling in cancer: Challenges and opportunities.
Lorenzi L, Avila Cobos F, Decock A, Everaert C, Helsmoortel H, Lefever S, Verboom K, Volders PJ, Speleman F, Vandesompele J, Mestdagh P. Lorenzi L, et al. Among authors: avila cobos f. Genes Chromosomes Cancer. 2019 Apr;58(4):191-199. doi: 10.1002/gcc.22709. Epub 2019 Jan 20. Genes Chromosomes Cancer. 2019. PMID: 30461116 Review.
Effective methods for bulk RNA-seq deconvolution using scnRNA-seq transcriptomes.
Cobos FA, Panah MJN, Epps J, Long X, Man TK, Chiu HS, Chomsky E, Kiner E, Krueger MJ, di Bernardo D, Voloch L, Molenaar J, van Hooff SR, Westermann F, Jansky S, Redell ML, Mestdagh P, Sumazin P. Cobos FA, et al. Genome Biol. 2023 Aug 1;24(1):177. doi: 10.1186/s13059-023-03016-6. Genome Biol. 2023. PMID: 37528411 Free PMC article.
Robust sequential biophysical fractionation of blood plasma to study variations in the biomolecular landscape of systemically circulating extracellular vesicles across clinical conditions.
Vergauwen G, Tulkens J, Pinheiro C, Avila Cobos F, Dedeyne S, De Scheerder MA, Vandekerckhove L, Impens F, Miinalainen I, Braems G, Gevaert K, Mestdagh P, Vandesompele J, Denys H, De Wever O, Hendrix A. Vergauwen G, et al. Among authors: avila cobos f. J Extracell Vesicles. 2021 Aug;10(10):e12122. doi: 10.1002/jev2.12122. Epub 2021 Aug 14. J Extracell Vesicles. 2021. PMID: 34429857 Free PMC article.
The RNA Atlas expands the catalog of human non-coding RNAs.
Lorenzi L, Chiu HS, Avila Cobos F, Gross S, Volders PJ, Cannoodt R, Nuytens J, Vanderheyden K, Anckaert J, Lefever S, Tay AP, de Bony EJ, Trypsteen W, Gysens F, Vromman M, Goovaerts T, Hansen TB, Kuersten S, Nijs N, Taghon T, Vermaelen K, Bracke KR, Saeys Y, De Meyer T, Deshpande NP, Anande G, Chen TW, Wilkins MR, Unnikrishnan A, De Preter K, Kjems J, Koster J, Schroth GP, Vandesompele J, Sumazin P, Mestdagh P. Lorenzi L, et al. Among authors: avila cobos f. Nat Biotechnol. 2021 Nov;39(11):1453-1465. doi: 10.1038/s41587-021-00936-1. Epub 2021 Jun 17. Nat Biotechnol. 2021. PMID: 34140680
Charting Extracellular Transcriptomes in The Human Biofluid RNA Atlas.
Hulstaert E, Morlion A, Avila Cobos F, Verniers K, Nuytens J, Vanden Eynde E, Yigit N, Anckaert J, Geerts A, Hindryckx P, Jacques P, Brusselle G, Bracke KR, Maes T, Malfait T, Derveaux T, Ninclaus V, Van Cauwenbergh C, Roelens K, Roets E, Hemelsoet D, Tilleman K, Brochez L, Kuersten S, Simon LM, Karg S, Kautzky-Willers A, Leutner M, Nöhammer C, Slaby O, Prins RW, Koster J, Lefever S, Schroth GP, Vandesompele J, Mestdagh P. Hulstaert E, et al. Among authors: avila cobos f. Cell Rep. 2020 Dec 29;33(13):108552. doi: 10.1016/j.celrep.2020.108552. Cell Rep. 2020. PMID: 33378673 Free article.
Publisher Correction: The RNA Atlas expands the catalog of human non-coding RNAs.
Lorenzi L, Chiu HS, Avila Cobos F, Gross S, Volders PJ, Cannoodt R, Nuytens J, Vanderheyden K, Anckaert J, Lefever S, Tay AP, de Bony EJ, Trypsteen W, Gysens F, Vromman M, Goovaerts T, Hansen TB, Kuersten S, Nijs N, Taghon T, Vermaelen K, Bracke KR, Saeys Y, De Meyer T, Deshpande NP, Anande G, Chen TW, Wilkins MR, Unnikrishnan A, De Preter K, Kjems J, Koster J, Schroth GP, Vandesompele J, Sumazin P, Mestdagh P. Lorenzi L, et al. Among authors: avila cobos f. Nat Biotechnol. 2021 Nov;39(11):1467. doi: 10.1038/s41587-021-00996-3. Nat Biotechnol. 2021. PMID: 34183863 No abstract available.
Zipper plot: visualizing transcriptional activity of genomic regions.
Avila Cobos F, Anckaert J, Volders PJ, Everaert C, Rombaut D, Vandesompele J, De Preter K, Mestdagh P. Avila Cobos F, et al. BMC Bioinformatics. 2017 May 2;18(1):231. doi: 10.1186/s12859-017-1651-7. BMC Bioinformatics. 2017. PMID: 28464823 Free PMC article.
19 results