Ekaterina Savitskaya - Search Results

Year	Number of Results
2003	1
2004	1
2005	2
2006	3
2007	1
2008	1
2009	2
2010	1
2013	1
2014	2
2015	4
2016	2
2017	3
2018	2
2019	3
2020	1
2021	2
2022	1
2024	0

1

Mapping CRISPR spaceromes reveals vast host-specific viromes of prokaryotes.

Shmakov SA, Wolf YI, Savitskaya E, Severinov KV, Koonin EV. Shmakov SA, et al. Among authors: savitskaya e. Commun Biol. 2020 Jun 22;3(1):321. doi: 10.1038/s42003-020-1014-1. Commun Biol. 2020. PMID: 32572116 Free PMC article.

2

Detection of spacer precursors formed in vivo during primed CRISPR adaptation.

Shiriaeva AA, Savitskaya E, Datsenko KA, Vvedenskaya IO, Fedorova I, Morozova N, Metlitskaya A, Sabantsev A, Nickels BE, Severinov K, Semenova E. Shiriaeva AA, et al. Among authors: savitskaya e. Nat Commun. 2019 Oct 10;10(1):4603. doi: 10.1038/s41467-019-12417-w. Nat Commun. 2019. PMID: 31601800 Free PMC article.

3

Prespacers formed during primed adaptation associate with the Cas1-Cas2 adaptation complex and the Cas3 interference nuclease-helicase.

Musharova O, Medvedeva S, Klimuk E, Guzman NM, Titova D, Zgoda V, Shiriaeva A, Semenova E, Severinov K, Savitskaya E. Musharova O, et al. Among authors: savitskaya e. Proc Natl Acad Sci U S A. 2021 Jun 1;118(22):e2021291118. doi: 10.1073/pnas.2021291118. Proc Natl Acad Sci U S A. 2021. PMID: 34035168 Free PMC article.

4

Uncertainty-aware and interpretable evaluation of Cas9-gRNA and Cas12a-gRNA specificity for fully matched and partially mismatched targets with Deep Kernel Learning.

Kirillov B, Savitskaya E, Panov M, Ogurtsov AY, Shabalina SA, Koonin EV, Severinov KV. Kirillov B, et al. Among authors: savitskaya e. Nucleic Acids Res. 2022 Jan 25;50(2):e11. doi: 10.1093/nar/gkab1065. Nucleic Acids Res. 2022. PMID: 34791389 Free PMC article.

5

Pervasive generation of oppositely oriented spacers during CRISPR adaptation.

Shmakov S, Savitskaya E, Semenova E, Logacheva MD, Datsenko KA, Severinov K. Shmakov S, et al. Among authors: savitskaya e. Nucleic Acids Res. 2014 May;42(9):5907-16. doi: 10.1093/nar/gku226. Epub 2014 Apr 11. Nucleic Acids Res. 2014. PMID: 24728991 Free PMC article.

6

SCRAMBLER: A Tool for De Novo CRISPR Array Reconstruction and Its Application for Analysis of the Structure of Prokaryotic Populations.

Rykachevsky A, Stepakov A, Muzyukina P, Medvedeva S, Dobrovolski M, Burnaev E, Severinov K, Savitskaya E. Rykachevsky A, et al. Among authors: savitskaya e. CRISPR J. 2021 Oct;4(5):673-685. doi: 10.1089/crispr.2021.0012. CRISPR J. 2021. PMID: 34661428

7

Dynamics of Escherichia coli type I-E CRISPR spacers over 42 000 years.

Savitskaya E, Lopatina A, Medvedeva S, Kapustin M, Shmakov S, Tikhonov A, Artamonova II, Logacheva M, Severinov K. Savitskaya E, et al. Mol Ecol. 2017 Apr;26(7):2019-2026. doi: 10.1111/mec.13961. Epub 2017 Jan 17. Mol Ecol. 2017. PMID: 27997045 Free PMC article.

8

Genome Maintenance Proteins Modulate Autoimmunity Mediated Primed Adaptation by the Escherichia coli Type I-E CRISPR-Cas System.

Kurilovich E, Shiriaeva A, Metlitskaya A, Morozova N, Ivancic-Bace I, Severinov K, Savitskaya E. Kurilovich E, et al. Among authors: savitskaya e. Genes (Basel). 2019 Oct 31;10(11):872. doi: 10.3390/genes10110872. Genes (Basel). 2019. PMID: 31683605 Free PMC article.

9

Systematic analysis of Type I-E Escherichia coli CRISPR-Cas PAM sequences ability to promote interference and primed adaptation.

Musharova O, Sitnik V, Vlot M, Savitskaya E, Datsenko KA, Krivoy A, Fedorov I, Semenova E, Brouns SJJ, Severinov K. Musharova O, et al. Among authors: savitskaya e. Mol Microbiol. 2019 Jun;111(6):1558-1570. doi: 10.1111/mmi.14237. Epub 2019 Apr 6. Mol Microbiol. 2019. PMID: 30875129 Free PMC article.

10

High-throughput analysis of type I-E CRISPR/Cas spacer acquisition in E. coli.

Savitskaya E, Semenova E, Dedkov V, Metlitskaya A, Severinov K. Savitskaya E, et al. RNA Biol. 2013 May;10(5):716-25. doi: 10.4161/rna.24325. Epub 2013 Apr 25. RNA Biol. 2013. PMID: 23619643 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

30 results

Results by year

Search Page

Filters

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

Search Results

30 results

Results by year