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Page 1
Plasmids encode niche-specific traits in Lactobacillaceae.
Microb Genom. 2021 Mar;7(3):mgen000472. doi: 10.1099/mgen.0.000472. Epub 2020 Nov 9.
Microb Genom. 2021.
PMID: 33166245
Free PMC article.
Benchmarking of 16S rRNA gene databases using known strain sequences.
Dixit K, Davray D, Chaudhari D, Kadam P, Kshirsagar R, Shouche Y, Dhotre D, Saroj SD.
Dixit K, et al. Among authors: davray d.
Bioinformation. 2021 Mar 31;17(3):377-391. doi: 10.6026/97320630017377. eCollection 2021.
Bioinformation. 2021.
PMID: 34092959
Free PMC article.
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In-silico functional analysis of hypothetical proteins from Lactiplantibacillus plantarum plasmids reveals enrichment of cell envelope proteins.
Davray D, Kulkarni R.
Davray D, et al.
Plasmid. 2023 Jul;127:102693. doi: 10.1016/j.plasmid.2023.102693. Epub 2023 May 29.
Plasmid. 2023.
PMID: 37257733
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Non-redundant nature of Lactiplantibacillus plantarum plasmidome revealed by comparative genomic analysis of 105 strains.
Davray D, Bawane H, Kulkarni R.
Davray D, et al.
Food Microbiol. 2023 Feb;109:104153. doi: 10.1016/j.fm.2022.104153. Epub 2022 Sep 25.
Food Microbiol. 2023.
PMID: 36309449
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Genomic and physiological analyses of an indigenous strain, Enterococcus faecium 17OM39.
Ghattargi VC, Nimonkar YS, Burse SA, Davray D, Kumbhare SV, Shetty SA, Gaikwad MA, Suryavanshi MV, Doijad SP, Utage B, Sharma OP, Shouche YS, Meti BS, Pawar SP.
Ghattargi VC, et al. Among authors: davray d.
Funct Integr Genomics. 2018 Jul;18(4):385-399. doi: 10.1007/s10142-018-0596-x. Epub 2018 Mar 19.
Funct Integr Genomics. 2018.
PMID: 29556852
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A Diverse Repertoire of Exopolysaccharide Biosynthesis Gene Clusters in Lactobacillus Revealed by Comparative Analysis in 106 Sequenced Genomes.
Deo D, Davray D, Kulkarni R.
Deo D, et al. Among authors: davray d.
Microorganisms. 2019 Oct 11;7(10):444. doi: 10.3390/microorganisms7100444.
Microorganisms. 2019.
PMID: 31614693
Free PMC article.
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