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Page 1
PSINDB: the postsynaptic protein-protein interaction database.
Database (Oxford). 2022 Mar 2;2022(2022):baac007. doi: 10.1093/database/baac007.
Database (Oxford). 2022.
PMID: 35234850
Free PMC article.
Evaluation and Selection of Dynamic Protein Structural Ensembles with CoNSEnsX.
Dudola D, Kovács B, Gáspári Z.
Dudola D, et al.
Methods Mol Biol. 2020;2112:241-254. doi: 10.1007/978-1-0716-0270-6_16.
Methods Mol Biol. 2020.
PMID: 32006289
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DIPEND: An Open-Source Pipeline to Generate Ensembles of Disordered Segments Using Neighbor-Dependent Backbone Preferences.
Harmat Z, Dudola D, Gáspári Z.
Harmat Z, et al. Among authors: dudola d.
Biomolecules. 2021 Oct 12;11(10):1505. doi: 10.3390/biom11101505.
Biomolecules. 2021.
PMID: 34680137
Free PMC article.
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Detection of single alpha-helices in large protein sequence sets using hardware acceleration.
Kovács Á, Dudola D, Nyitray L, Tóth G, Nagy Z, Gáspári Z.
Kovács Á, et al. Among authors: dudola d.
J Struct Biol. 2018 Oct;204(1):109-116. doi: 10.1016/j.jsb.2018.06.005. Epub 2018 Jun 13.
J Struct Biol. 2018.
PMID: 29908248
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Consensus Prediction of Charged Single Alpha-Helices with CSAHserver.
Dudola D, Tóth G, Nyitray L, Gáspári Z.
Dudola D, et al.
Methods Mol Biol. 2017;1484:25-34. doi: 10.1007/978-1-4939-6406-2_3.
Methods Mol Biol. 2017.
PMID: 27787817
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CoNSEnsX+ Webserver for the Analysis of Protein Structural Ensembles Reflecting Experimentally Determined Internal Dynamics.
Dudola D, Kovács B, Gáspári Z.
Dudola D, et al.
J Chem Inf Model. 2017 Aug 28;57(8):1728-1734. doi: 10.1021/acs.jcim.7b00066. Epub 2017 Aug 3.
J Chem Inf Model. 2017.
PMID: 28703583
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Ensemble-Based Analysis of the Dynamic Allostery in the PSD-95 PDZ3 Domain in Relation to the General Variability of PDZ Structures.
Dudola D, Hinsenkamp A, Gáspári Z.
Dudola D, et al.
Int J Mol Sci. 2020 Nov 6;21(21):8348. doi: 10.3390/ijms21218348.
Int J Mol Sci. 2020.
PMID: 33172212
Free PMC article.
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