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Computational analysis of RNA-seq.
Givan SA, Bottoms CA, Spollen WG. Givan SA, et al. Among authors: bottoms ca. Methods Mol Biol. 2012;883:201-19. doi: 10.1007/978-1-61779-839-9_16. Methods Mol Biol. 2012. PMID: 22589136
Phylogeny and multiple independent whole-genome duplication events in the Brassicales.
Mabry ME, Brose JM, Blischak PD, Sutherland B, Dismukes WT, Bottoms CA, Edger PP, Washburn JD, An H, Hall JC, McKain MR, Al-Shehbaz I, Barker MS, Schranz ME, Conant GC, Pires JC. Mabry ME, et al. Among authors: bottoms ca. Am J Bot. 2020 Aug;107(8):1148-1164. doi: 10.1002/ajb2.1514. Epub 2020 Aug 24. Am J Bot. 2020. PMID: 32830865 Free PMC article.
IView: introgression library visualization and query tool.
Bottoms CA, Flint-Garcia S, McMullen MD. Bottoms CA, et al. BMC Bioinformatics. 2010 Oct 7;11 Suppl 6(Suppl 6):S28. doi: 10.1186/1471-2105-11-S6-S28. BMC Bioinformatics. 2010. PMID: 20946612 Free PMC article.
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