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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2002 4
2004 1
2005 2
2006 5
2008 2
2010 1
2011 1
2012 4
2013 7
2014 8
2015 7
2016 6
2017 7
2018 4
2019 11
2020 7
2021 9
2022 7
2023 1
2024 5

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95 results

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Page 1
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.
Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Will… See abstract for full author list ➔ Bolyen E, et al. Among authors: brown ct. Nat Biotechnol. 2019 Aug;37(8):852-857. doi: 10.1038/s41587-019-0209-9. Nat Biotechnol. 2019. PMID: 31341288 Free PMC article. No abstract available.
The Degenerate Tale of Ascidian Tails.
Fodor ACA, Powers MM, Andrykovich K, Liu J, Lowe EK, Brown CT, Di Gregorio A, Stolfi A, Swalla BJ. Fodor ACA, et al. Among authors: brown ct. Integr Comp Biol. 2021 Sep 8;61(2):358-369. doi: 10.1093/icb/icab022. Integr Comp Biol. 2021. PMID: 33881514 Free PMC article. Review.
Microbial metabolites in the marine carbon cycle.
Moran MA, Kujawinski EB, Schroer WF, Amin SA, Bates NR, Bertrand EM, Braakman R, Brown CT, Covert MW, Doney SC, Dyhrman ST, Edison AS, Eren AM, Levine NM, Li L, Ross AC, Saito MA, Santoro AE, Segrè D, Shade A, Sullivan MB, Vardi A. Moran MA, et al. Among authors: brown ct. Nat Microbiol. 2022 Apr;7(4):508-523. doi: 10.1038/s41564-022-01090-3. Epub 2022 Apr 1. Nat Microbiol. 2022. PMID: 35365785 Review.
MAGs achieve lineage resolution.
Reiter TE, Brown CT. Reiter TE, et al. Among authors: brown ct. Nat Microbiol. 2022 Feb;7(2):193-194. doi: 10.1038/s41564-021-01027-2. Nat Microbiol. 2022. PMID: 34980920 No abstract available.
Critical Assessment of Metagenome Interpretation: the second round of challenges.
Meyer F, Fritz A, Deng ZL, Koslicki D, Lesker TR, Gurevich A, Robertson G, Alser M, Antipov D, Beghini F, Bertrand D, Brito JJ, Brown CT, Buchmann J, Buluç A, Chen B, Chikhi R, Clausen PTLC, Cristian A, Dabrowski PW, Darling AE, Egan R, Eskin E, Georganas E, Goltsman E, Gray MA, Hansen LH, Hofmeyr S, Huang P, Irber L, Jia H, Jørgensen TS, Kieser SD, Klemetsen T, Kola A, Kolmogorov M, Korobeynikov A, Kwan J, LaPierre N, Lemaitre C, Li C, Limasset A, Malcher-Miranda F, Mangul S, Marcelino VR, Marchet C, Marijon P, Meleshko D, Mende DR, Milanese A, Nagarajan N, Nissen J, Nurk S, Oliker L, Paoli L, Peterlongo P, Piro VC, Porter JS, Rasmussen S, Rees ER, Reinert K, Renard B, Robertsen EM, Rosen GL, Ruscheweyh HJ, Sarwal V, Segata N, Seiler E, Shi L, Sun F, Sunagawa S, Sørensen SJ, Thomas A, Tong C, Trajkovski M, Tremblay J, Uritskiy G, Vicedomini R, Wang Z, Wang Z, Wang Z, Warren A, Willassen NP, Yelick K, You R, Zeller G, Zhao Z, Zhu S, Zhu J, Garrido-Oter R, Gastmeier P, Hacquard S, Häußler S, Khaledi A, Maechler F, Mesny F, Radutoiu S, Schulze-Lefert P, Smit N, Strowig T, Bremges A, Sczyrba A, McHardy AC. Meyer F, et al. Among authors: brown ct. Nat Methods. 2022 Apr;19(4):429-440. doi: 10.1038/s41592-022-01431-4. Epub 2022 Apr 8. Nat Methods. 2022. PMID: 35396482 Free PMC article.
Ten simple rules to cultivate transdisciplinary collaboration in data science.
Sahneh F, Balk MA, Kisley M, Chan CK, Fox M, Nord B, Lyons E, Swetnam T, Huppenkothen D, Sutherland W, Walls RL, Quinn DP, Tarin T, LeBauer D, Ribes D, Birnie DP 3rd, Lushbough C, Carr E, Nearing G, Fischer J, Tyle K, Carrasco L, Lang M, Rose PW, Rushforth RR, Roy S, Matheson T, Lee T, Brown CT, Teal TK, Papeș M, Kobourov S, Merchant N. Sahneh F, et al. Among authors: brown ct. PLoS Comput Biol. 2021 May 13;17(5):e1008879. doi: 10.1371/journal.pcbi.1008879. eCollection 2021 May. PLoS Comput Biol. 2021. PMID: 33983959 Free PMC article. No abstract available.
Whole-genome assembly of Culex tarsalis.
Main BJ, Marcantonio M, Johnston JS, Rasgon JL, Brown CT, Barker CM. Main BJ, et al. Among authors: brown ct. G3 (Bethesda). 2021 Feb 9;11(2):jkaa063. doi: 10.1093/g3journal/jkaa063. G3 (Bethesda). 2021. PMID: 33585869 Free PMC article.
Large-scale sequence comparisons with sourmash.
Pierce NT, Irber L, Reiter T, Brooks P, Brown CT. Pierce NT, et al. Among authors: brown ct. F1000Res. 2019 Jul 4;8:1006. doi: 10.12688/f1000research.19675.1. eCollection 2019. F1000Res. 2019. PMID: 31508216 Free PMC article.
Streamlining data-intensive biology with workflow systems.
Reiter T, Brooks PT, Irber L, Joslin SEK, Reid CM, Scott C, Brown CT, Pierce-Ward NT. Reiter T, et al. Among authors: brown ct. Gigascience. 2021 Jan 13;10(1):giaa140. doi: 10.1093/gigascience/giaa140. Gigascience. 2021. PMID: 33438730 Free PMC article.
95 results