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Page 1
Recent advances in user-friendly computational tools to engineer protein function.
Brief Bioinform. 2021 May 20;22(3):bbaa150. doi: 10.1093/bib/bbaa150.
Brief Bioinform. 2021.
PMID: 32743637
Free PMC article.
Review.
Dynamics, a Powerful Component of Current and Future in Silico Approaches for Protein Design and Engineering.
Surpeta B, Sequeiros-Borja CE, Brezovsky J.
Surpeta B, et al.
Int J Mol Sci. 2020 Apr 14;21(8):2713. doi: 10.3390/ijms21082713.
Int J Mol Sci. 2020.
PMID: 32295283
Free PMC article.
Review.
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Divide-and-conquer approach to study protein tunnels in long molecular dynamics simulations.
Sequeiros-Borja C, Surpeta B, Marchlewski I, Brezovsky J.
Sequeiros-Borja C, et al. Among authors: surpeta b.
MethodsX. 2022 Dec 16;10:101968. doi: 10.1016/j.mex.2022.101968. eCollection 2023.
MethodsX. 2022.
PMID: 36582480
Free PMC article.
Item in Clipboard
TransportTools: a library for high-throughput analyses of internal voids in biomolecules and ligand transport through them.
Brezovsky J, Thirunavukarasu AS, Surpeta B, Sequeiros-Borja CE, Mandal N, Sarkar DK, Dongmo Foumthuim CJ, Agrawal N.
Brezovsky J, et al. Among authors: surpeta b.
Bioinformatics. 2022 Mar 4;38(6):1752-1753. doi: 10.1093/bioinformatics/btab872.
Bioinformatics. 2022.
PMID: 34971366
Free PMC article.
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