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Using metacommunity ecology to understand environmental metabolomes.
Danczak RE, Chu RK, Fansler SJ, Goldman AE, Graham EB, Tfaily MM, Toyoda J, Stegen JC. Danczak RE, et al. Among authors: goldman ae. Nat Commun. 2020 Dec 11;11(1):6369. doi: 10.1038/s41467-020-19989-y. Nat Commun. 2020. PMID: 33311510 Free PMC article.
A functional microbiome catalog crowdsourced from North American rivers.
Borton MA, McGivern BB, Willi KR, Woodcroft BJ, Mosier AC, Singleton DM, Bambakidis T, Pelly A, Liu F, Edirisinghe JN, Faria JP, Leleiwi I, Daly RA, Goldman AE, Wilkins MJ, Hall EK, Pennacchio C, Roux S, Eloe-Fadrosh EA, Good SP, Sullivan MB, Henry CS, Wood-Charlson EM, Ross MRV, Miller CS, Crump BC, Stegen JC, Wrighton KC. Borton MA, et al. Among authors: goldman ae. bioRxiv [Preprint]. 2023 Jul 26:2023.07.22.550117. doi: 10.1101/2023.07.22.550117. bioRxiv. 2023. PMID: 37502915 Free PMC article. Preprint.
Ecological theory applied to environmental metabolomes reveals compositional divergence despite conserved molecular properties.
Danczak RE, Goldman AE, Chu RK, Toyoda JG, Garayburu-Caruso VA, Tolić N, Graham EB, Morad JW, Renteria L, Wells JR, Herzog SP, Ward AS, Stegen JC. Danczak RE, et al. Among authors: goldman ae. Sci Total Environ. 2021 Sep 20;788:147409. doi: 10.1016/j.scitotenv.2021.147409. Epub 2021 May 8. Sci Total Environ. 2021. PMID: 34022577
Enabling FAIR data in Earth and environmental science with community-centric (meta)data reporting formats.
Crystal-Ornelas R, Varadharajan C, O'Ryan D, Beilsmith K, Bond-Lamberty B, Boye K, Burrus M, Cholia S, Christianson DS, Crow M, Damerow J, Ely KS, Goldman AE, Heinz SL, Hendrix VC, Kakalia Z, Mathes K, O'Brien F, Pennington SC, Robles E, Rogers A, Simmonds M, Velliquette T, Weisenhorn P, Welch JN, Whitenack K, Agarwal DA. Crystal-Ornelas R, et al. Among authors: goldman ae. Sci Data. 2022 Nov 14;9(1):700. doi: 10.1038/s41597-022-01606-w. Sci Data. 2022. PMID: 36376356 Free PMC article.
Using Community Science to Reveal the Global Chemogeography of River Metabolomes.
Garayburu-Caruso VA, Danczak RE, Stegen JC, Renteria L, Mccall M, Goldman AE, Chu RK, Toyoda J, Resch CT, Torgeson JM, Wells J, Fansler S, Kumar S, Graham EB. Garayburu-Caruso VA, et al. Among authors: goldman ae. Metabolites. 2020 Dec 20;10(12):518. doi: 10.3390/metabo10120518. Metabolites. 2020. PMID: 33419380 Free PMC article.