Pesole G - Search Results

1

Detection of ribonucleotides embedded in DNA by Nanopore sequencing.

Grasso L, Fonzino A, Manzari C, Leonardi T, Picardi E, Gissi C, Lazzaro F, Pesole G, Muzi-Falconi M. Grasso L, et al. Among authors: pesole g. Commun Biol. 2024 Apr 23;7(1):491. doi: 10.1038/s42003-024-06077-w. Commun Biol. 2024. PMID: 38654143 Free PMC article.

2

Transcript mapping and genome annotation of ascidian mtDNA using EST data.

Gissi C, Pesole G. Gissi C, et al. Among authors: pesole g. Genome Res. 2003 Sep;13(9):2203-12. doi: 10.1101/gr.1227803. Epub 2003 Aug 12. Genome Res. 2003. PMID: 12915488 Free PMC article.

3

Computational methods for ab initio and comparative gene finding.

Picardi E, Pesole G. Picardi E, et al. Among authors: pesole g. Methods Mol Biol. 2010;609:269-84. doi: 10.1007/978-1-60327-241-4_16. Methods Mol Biol. 2010. PMID: 20221925 Review.

4

Detection of post-transcriptional RNA editing events.

Picardi E, D'Erchia AM, Gallo A, Pesole G. Picardi E, et al. Among authors: pesole g. Methods Mol Biol. 2015;1269:189-205. doi: 10.1007/978-1-4939-2291-8_12. Methods Mol Biol. 2015. PMID: 25577380

5

Elucidating the editome: bioinformatics approaches for RNA editing detection.

Diroma MA, Ciaccia L, Pesole G, Picardi E. Diroma MA, et al. Among authors: pesole g. Brief Bioinform. 2019 Mar 22;20(2):436-447. doi: 10.1093/bib/bbx129. Brief Bioinform. 2019. PMID: 29040360 Review.

6

Critical assessment of bioinformatics methods for the characterization of pathological repeat expansions with single-molecule sequencing data.

Chiara M, Zambelli F, Picardi E, Horner DS, Pesole G. Chiara M, et al. Among authors: pesole g. Brief Bioinform. 2020 Dec 1;21(6):1971-1986. doi: 10.1093/bib/bbz099. Brief Bioinform. 2020. PMID: 31792498 Free article.

7

High-Throughput Sequencing to Detect DNA-RNA Changes.

Lo Giudice C, Pesole G, Picardi E. Lo Giudice C, et al. Among authors: pesole g. Methods Mol Biol. 2021;2181:193-212. doi: 10.1007/978-1-0716-0787-9_12. Methods Mol Biol. 2021. PMID: 32729082

8

HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Chiara M, Horner DS, Ferrandi E, Gissi C, Pesole G. Chiara M, et al. Among authors: pesole g. Commun Biol. 2023 Apr 22;6(1):443. doi: 10.1038/s42003-023-04784-4. Commun Biol. 2023. PMID: 37087497 Free PMC article.

9

EasyCluster: a fast and efficient gene-oriented clustering tool for large-scale transcriptome data.

Picardi E, Mignone F, Pesole G. Picardi E, et al. Among authors: pesole g. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6(Suppl 6):S10. doi: 10.1186/1471-2105-10-S6-S10. BMC Bioinformatics. 2009. PMID: 19534735 Free PMC article.

10

Tissue-specific mtDNA abundance from exome data and its correlation with mitochondrial transcription, mass and respiratory activity.

D'Erchia AM, Atlante A, Gadaleta G, Pavesi G, Chiara M, De Virgilio C, Manzari C, Mastropasqua F, Prazzoli GM, Picardi E, Gissi C, Horner D, Reyes A, Sbisà E, Tullo A, Pesole G. D'Erchia AM, et al. Among authors: pesole g. Mitochondrion. 2015 Jan;20:13-21. doi: 10.1016/j.mito.2014.10.005. Epub 2014 Nov 1. Mitochondrion. 2015. PMID: 25446395

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