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Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology.
Beiki H, Murdoch BM, Park CA, Kern C, Kontechy D, Becker G, Rincon G, Jiang H, Zhou H, Thorne J, Koltes JE, Michal JJ, Davenport K, Rijnkels M, Ross PJ, Hu R, Corum S, McKay S, Smith TPL, Liu W, Ma W, Zhang X, Xu X, Han X, Jiang Z, Hu ZL, Reecy JM. Beiki H, et al. Among authors: murdoch bm. Gigascience. 2024 Jan 2;13:giae019. doi: 10.1093/gigascience/giae019. Gigascience. 2024. PMID: 38626724 Free PMC article.
De novo assembly of the cattle reference genome with single-molecule sequencing.
Rosen BD, Bickhart DM, Schnabel RD, Koren S, Elsik CG, Tseng E, Rowan TN, Low WY, Zimin A, Couldrey C, Hall R, Li W, Rhie A, Ghurye J, McKay SD, Thibaud-Nissen F, Hoffman J, Murdoch BM, Snelling WM, McDaneld TG, Hammond JA, Schwartz JC, Nandolo W, Hagen DE, Dreischer C, Schultheiss SJ, Schroeder SG, Phillippy AM, Cole JB, Van Tassell CP, Liu G, Smith TPL, Medrano JF. Rosen BD, et al. Among authors: murdoch bm. Gigascience. 2020 Mar 1;9(3):giaa021. doi: 10.1093/gigascience/giaa021. Gigascience. 2020. PMID: 32191811 Free PMC article.
AgAnimalGenomes: browsers for viewing and manually annotating farm animal genomes.
Triant DA, Walsh AT, Hartley GA, Petry B, Stegemiller MR, Nelson BM, McKendrick MM, Fuller EP, Cockett NE, Koltes JE, McKay SD, Green JA, Murdoch BM, Hagen DE, Elsik CG. Triant DA, et al. Among authors: murdoch bm. Mamm Genome. 2023 Sep;34(3):418-436. doi: 10.1007/s00335-023-10008-1. Epub 2023 Jul 17. Mamm Genome. 2023. PMID: 37460664 Free PMC article.
Genome-Wide Association Analyses of Fertility Traits in Beef Heifers.
Stegemiller MR, Murdoch GK, Rowan TN, Davenport KM, Becker GM, Hall JB, Murdoch BM. Stegemiller MR, et al. Among authors: murdoch gk, murdoch bm. Genes (Basel). 2021 Feb 2;12(2):217. doi: 10.3390/genes12020217. Genes (Basel). 2021. PMID: 33540904 Free PMC article.
Characterizing Genetic Regulatory Elements in Ovine Tissues.
Davenport KM, Massa AT, Bhattarai S, McKay SD, Mousel MR, Herndon MK, White SN, Cockett NE, Smith TPL, Murdoch BM; Ovine FAANG Project Consortium. Davenport KM, et al. Among authors: murdoch bm. Front Genet. 2021 May 20;12:628849. doi: 10.3389/fgene.2021.628849. eCollection 2021. Front Genet. 2021. PMID: 34093640 Free PMC article.
68 results