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Learning epistatic polygenic phenotypes with Boolean interactions.
Behr M, Kumbier K, Cordova-Palomera A, Aguirre M, Ronen O, Ye C, Ashley E, Butte AJ, Arnaout R, Brown B, Priest J, Yu B. Behr M, et al. Among authors: yu b. PLoS One. 2024 Apr 16;19(4):e0298906. doi: 10.1371/journal.pone.0298906. eCollection 2024. PLoS One. 2024. PMID: 38625909 Free PMC article.
Veridical data science.
Yu B, Kumbier K. Yu B, et al. Proc Natl Acad Sci U S A. 2020 Feb 25;117(8):3920-3929. doi: 10.1073/pnas.1901326117. Epub 2020 Feb 13. Proc Natl Acad Sci U S A. 2020. PMID: 32054788 Free PMC article.
Epistasis regulates genetic control of cardiac hypertrophy.
Wang Q, Tang TM, Youlton N, Weldy CS, Kenney AM, Ronen O, Weston Hughes J, Chin ET, Sutton SC, Agarwal A, Li X, Behr M, Kumbier K, Moravec CS, Wilson Tang WH, Margulies KB, Cappola TP, Butte AJ, Arnaout R, Brown JB, Priest JR, Parikh VN, Yu B, Ashley EA. Wang Q, et al. Among authors: yu b. medRxiv [Preprint]. 2024 May 4:2023.11.06.23297858. doi: 10.1101/2023.11.06.23297858. medRxiv. 2024. PMID: 37987017 Free PMC article. Preprint.
Epistasis regulates genetic control of cardiac hypertrophy.
Wang Q, Tang TM, Youlton N, Weldy CS, Kenney AM, Ronen O, Hughes JW, Chin ET, Sutton SC, Agarwal A, Li X, Behr M, Kumbier K, Moravec CS, Tang WHW, Margulies KB, Cappola TP, Butte AJ, Arnaout R, Brown JB, Priest JR, Parikh VN, Yu B, Ashley EA. Wang Q, et al. Among authors: yu b. Res Sq [Preprint]. 2023 Nov 20:rs.3.rs-3509208. doi: 10.21203/rs.3.rs-3509208/v1. Res Sq. 2023. PMID: 38045390 Free PMC article. Preprint.
Definitions, methods, and applications in interpretable machine learning.
Murdoch WJ, Singh C, Kumbier K, Abbasi-Asl R, Yu B. Murdoch WJ, et al. Among authors: yu b. Proc Natl Acad Sci U S A. 2019 Oct 29;116(44):22071-22080. doi: 10.1073/pnas.1900654116. Epub 2019 Oct 16. Proc Natl Acad Sci U S A. 2019. PMID: 31619572 Free PMC article.
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