Chen Z - Search Results

1

Unveiling the genomic landscape of Salmonella enterica serotypes Typhimurium, Newport, and Infantis in Latin American surface waters: a comparative analysis.

Chen Z, Toro M, Moreno-Switt AI, Adell AD, Delgado-Suárez EJ, Bonelli RR, Oliveira CJB, Reyes-Jara A, Huang X, Albee B, Grim CJ, Allard M, Tallent SM, Brown EW, Bell RL, Meng J. Chen Z, et al. Microbiol Spectr. 2024 May 2;12(5):e0004724. doi: 10.1128/spectrum.00047-24. Epub 2024 Mar 28. Microbiol Spectr. 2024. PMID: 38546218 Free PMC article.

2

Genomic analyses of multidrug-resistant Salmonella Indiana, Typhimurium, and Enteritidis isolates using MinION and MiSeq sequencing technologies.

Chen Z, Kuang D, Xu X, González-Escalona N, Erickson DL, Brown E, Meng J. Chen Z, et al. PLoS One. 2020 Jul 2;15(7):e0235641. doi: 10.1371/journal.pone.0235641. eCollection 2020. PLoS One. 2020. PMID: 32614888 Free PMC article.

3

Benchmarking hybrid assembly approaches for genomic analyses of bacterial pathogens using Illumina and Oxford Nanopore sequencing.

Chen Z, Erickson DL, Meng J. Chen Z, et al. BMC Genomics. 2020 Sep 14;21(1):631. doi: 10.1186/s12864-020-07041-8. BMC Genomics. 2020. PMID: 32928108 Free PMC article.

4

Characterization of Mobile Genetic Elements Using Long-Read Sequencing for Tracking Listeria monocytogenes from Food Processing Environments.

Kwon HJ, Chen Z, Evans P, Meng J, Chen Y. Kwon HJ, et al. Among authors: chen z, chen y. Pathogens. 2020 Oct 7;9(10):822. doi: 10.3390/pathogens9100822. Pathogens. 2020. PMID: 33036450 Free PMC article.

5

Benchmarking Long-Read Assemblers for Genomic Analyses of Bacterial Pathogens Using Oxford Nanopore Sequencing.

Chen Z, Erickson DL, Meng J. Chen Z, et al. Int J Mol Sci. 2020 Dec 1;21(23):9161. doi: 10.3390/ijms21239161. Int J Mol Sci. 2020. PMID: 33271875 Free PMC article.

6

Polishing the Oxford Nanopore long-read assemblies of bacterial pathogens with Illumina short reads to improve genomic analyses.

Chen Z, Erickson DL, Meng J. Chen Z, et al. Genomics. 2021 May;113(3):1366-1377. doi: 10.1016/j.ygeno.2021.03.018. Epub 2021 Mar 11. Genomics. 2021. PMID: 33716184 Free article.

7

Persistence of Salmonella enterica and Enterococcus faecium NRRL B-2354 on Baby Spinach Subjected to Temperature Abuse after Exposure to Sub-Lethal Stresses.

Chen Z, Meng J. Chen Z, et al. Foods. 2021 Sep 10;10(9):2141. doi: 10.3390/foods10092141. Foods. 2021. PMID: 34574255 Free PMC article.

8

Genetic Determinants of Stress Resistance in Desiccated Salmonella enterica.

Wang Z, Zhu T, Chen Z, Meng J, Simpson DJ, Gänzle MG. Wang Z, et al. Among authors: chen z. Appl Environ Microbiol. 2021 Nov 10;87(23):e0168321. doi: 10.1128/AEM.01683-21. Epub 2021 Sep 29. Appl Environ Microbiol. 2021. PMID: 34586905 Free PMC article.

9

Genomic Epidemiology of Salmonella enterica Circulating in Surface Waters Used in Agriculture and Aquaculture in Central Mexico.

Ballesteros-Nova NE, Sánchez S, Steffani JL, Sierra LC, Chen Z, Ruíz-López FA, Bell RL, Reed EA, Balkey M, Rubio-Lozano MS, Soberanis-Ramos O, Barona-Gómez F, Brown EW, Allard MW, Meng J, Delgado-Suárez EJ. Ballesteros-Nova NE, et al. Among authors: chen z. Appl Environ Microbiol. 2022 Mar 8;88(5):e0214921. doi: 10.1128/aem.02149-21. Epub 2022 Jan 12. Appl Environ Microbiol. 2022. PMID: 35020454 Free PMC article.

10

Critical Assessment of Short-Read Assemblers for the Metagenomic Identification of Foodborne and Waterborne Pathogens Using Simulated Bacterial Communities.

Chen Z, Meng J. Chen Z, et al. Microorganisms. 2022 Dec 6;10(12):2416. doi: 10.3390/microorganisms10122416. Microorganisms. 2022. PMID: 36557669 Free PMC article.

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