Cuperus JT - Search Results

1

Plant enhancers exhibit both cooperative and additive interactions among their functional elements.

Jores T, Tonnies J, Mueth NA, Romanowski A, Fields S, Cuperus JT, Queitsch C. Jores T, et al. Among authors: cuperus jt. Plant Cell. 2024 Mar 21:koae088. doi: 10.1093/plcell/koae088. Online ahead of print. Plant Cell. 2024. PMID: 38513612

2

A tetO Toolkit To Alter Expression of Genes in Saccharomyces cerevisiae.

Cuperus JT, Lo RS, Shumaker L, Proctor J, Fields S. Cuperus JT, et al. ACS Synth Biol. 2015 Jul 17;4(7):842-52. doi: 10.1021/sb500363y. Epub 2015 Mar 17. ACS Synth Biol. 2015. PMID: 25742460 Free PMC article.

3

Deep learning of the regulatory grammar of yeast 5' untranslated regions from 500,000 random sequences.

Cuperus JT, Groves B, Kuchina A, Rosenberg AB, Jojic N, Fields S, Seelig G. Cuperus JT, et al. Genome Res. 2017 Dec;27(12):2015-2024. doi: 10.1101/gr.224964.117. Epub 2017 Nov 2. Genome Res. 2017. PMID: 29097404 Free PMC article.

4

Preferences in a trait decision determined by transcription factor variants.

Dorrity MW, Cuperus JT, Carlisle JA, Fields S, Queitsch C. Dorrity MW, et al. Among authors: cuperus jt. Proc Natl Acad Sci U S A. 2018 Aug 21;115(34):E7997-E8006. doi: 10.1073/pnas.1805882115. Epub 2018 Aug 1. Proc Natl Acad Sci U S A. 2018. PMID: 30068600 Free PMC article.

5

Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana.

Jean-Baptiste K, McFaline-Figueroa JL, Alexandre CM, Dorrity MW, Saunders L, Bubb KL, Trapnell C, Fields S, Queitsch C, Cuperus JT. Jean-Baptiste K, et al. Among authors: cuperus jt. Plant Cell. 2019 May;31(5):993-1011. doi: 10.1105/tpc.18.00785. Epub 2019 Mar 28. Plant Cell. 2019. PMID: 30923229 Free PMC article.

6

Identification of Plant Enhancers and Their Constituent Elements by STARR-seq in Tobacco Leaves.

Jores T, Tonnies J, Dorrity MW, Cuperus JT, Fields S, Queitsch C. Jores T, et al. Among authors: cuperus jt. Plant Cell. 2020 Jul;32(7):2120-2131. doi: 10.1105/tpc.20.00155. Epub 2020 May 14. Plant Cell. 2020. PMID: 32409318 Free PMC article.

7

Editorial overview: Technology development as a driver of biological discovery.

Cuperus JT, Queitsch C. Cuperus JT, et al. Curr Opin Plant Biol. 2020 Apr;54:A1-A4. doi: 10.1016/j.pbi.2020.06.001. Curr Opin Plant Biol. 2020. PMID: 32553358 No abstract available.

8

A single-cell view of the transcriptome during lateral root initiation in Arabidopsis thaliana.

Gala HP, Lanctot A, Jean-Baptiste K, Guiziou S, Chu JC, Zemke JE, George W, Queitsch C, Cuperus JT, Nemhauser JL. Gala HP, et al. Among authors: cuperus jt. Plant Cell. 2021 Aug 13;33(7):2197-2220. doi: 10.1093/plcell/koab101. Plant Cell. 2021. PMID: 33822225 Free PMC article.

9

Synthetic promoter designs enabled by a comprehensive analysis of plant core promoters.

Jores T, Tonnies J, Wrightsman T, Buckler ES, Cuperus JT, Fields S, Queitsch C. Jores T, et al. Among authors: cuperus jt. Nat Plants. 2021 Jun;7(6):842-855. doi: 10.1038/s41477-021-00932-y. Epub 2021 Jun 3. Nat Plants. 2021. PMID: 34083762 Free PMC article.

10

The regulatory landscape of Arabidopsis thaliana roots at single-cell resolution.

Dorrity MW, Alexandre CM, Hamm MO, Vigil AL, Fields S, Queitsch C, Cuperus JT. Dorrity MW, et al. Among authors: cuperus jt. Nat Commun. 2021 Jun 7;12(1):3334. doi: 10.1038/s41467-021-23675-y. Nat Commun. 2021. PMID: 34099698 Free PMC article.

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