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PHARE: a bioinformatics pipeline for compositional profiling of multiclonal Plasmodium falciparum infections from long-read Nanopore sequencing data.
Hosch S, Wagner P, Giger JN, Dubach N, Saavedra E, Perno CF, Gody JC, Pagonendji MS, Ngoagouni C, Ndoua C, Nsanzabana C, Vickos U, Daubenberger C, Schindler T. Hosch S, et al. Among authors: schindler t. J Antimicrob Chemother. 2024 May 2;79(5):987-996. doi: 10.1093/jac/dkae060. J Antimicrob Chemother. 2024. PMID: 38502783 Free PMC article.
Development and evaluation of PlasmoPod: A cartridge-based nucleic acid amplification test for rapid malaria diagnosis and surveillance.
Bechtold P, Wagner P, Hosch S, Gregorini M, Stark WJ, Gody JC, Kodia-Lenguetama ER, Pagonendji MS, Donfack OT, Phiri WP, García GA, Nsanzanbana C, Daubenberger CA, Schindler T, Vickos U. Bechtold P, et al. Among authors: schindler t. PLOS Glob Public Health. 2023 Sep 27;3(9):e0001516. doi: 10.1371/journal.pgph.0001516. eCollection 2023. PLOS Glob Public Health. 2023. PMID: 37756280 Free PMC article.
Genomic Surveillance Enables the Identification of Co-infections With Multiple SARS-CoV-2 Lineages in Equatorial Guinea.
Hosch S, Mpina M, Nyakurungu E, Borico NS, Obama TMA, Ovona MC, Wagner P, Rubin SE, Vickos U, Milang DVN, Ayekaba MO, Phiri WP, Daubenberger CA, Schindler T. Hosch S, et al. Among authors: schindler t. Front Public Health. 2022 Jan 4;9:818401. doi: 10.3389/fpubh.2021.818401. eCollection 2021. Front Public Health. 2022. PMID: 35059385 Free PMC article.
Gene Coverage Count and Classification (GC3): a locus sequence coverage assessment tool using short-read whole genome sequencing data, and its application to identify and classify histidine-rich protein 2 and 3 deletions in Plasmodium falciparum.
Stabler TC, Dwivedi A, Shrestha B, Joshi S, Schindler T, Ouattara A, García GA, Daubenberger C, Silva JC. Stabler TC, et al. Among authors: schindler t. Malar J. 2022 Nov 29;21(1):357. doi: 10.1186/s12936-022-04376-3. Malar J. 2022. PMID: 36447234 Free PMC article.
Whole-genome sequencing for One Health surveillance of antimicrobial resistance in conflict zones: a case study of Salmonella spp. and Campylobacter spp. in the West Bank, Palestine.
Abukhattab S, Hosch S, Abu-Rmeileh NME, Hasan S, Vonaesch P, Crump L, Hattendorf J, Daubenberger C, Zinsstag J, Schindler T. Abukhattab S, et al. Among authors: schindler t. Appl Environ Microbiol. 2023 Sep 28;89(9):e0065823. doi: 10.1128/aem.00658-23. Epub 2023 Sep 1. Appl Environ Microbiol. 2023. PMID: 37655921 Free PMC article.
Characterising co-infections with Plasmodium spp., Mansonella perstans or Loa loa in asymptomatic children, adults and elderly people living on Bioko Island using nucleic acids extracted from malaria rapid diagnostic tests.
Yoboue CA, Hosch S, Donfack OT, Guirou EA, Nlavo BM, Ayekaba MO, Guerra C, Phiri WP, Garcia GA, Schindler T, Daubenberger CA. Yoboue CA, et al. Among authors: schindler t. PLoS Negl Trop Dis. 2022 Jan 31;16(1):e0009798. doi: 10.1371/journal.pntd.0009798. eCollection 2022 Jan. PLoS Negl Trop Dis. 2022. PMID: 35100277 Free PMC article.
Rapid Identification of SARS-CoV-2 Variants of Concern Using a Portable peakPCR Platform.
Bechtold P, Wagner P, Hosch S, Siegrist D, Ruiz-Serrano A, Gregorini M, Mpina M, Ondó FA, Obama J, Ayekaba MO, Engler O, Stark WJ, Daubenberger CA, Schindler T. Bechtold P, et al. Among authors: schindler t. Anal Chem. 2021 Dec 14;93(49):16350-16359. doi: 10.1021/acs.analchem.1c02368. Epub 2021 Dec 1. Anal Chem. 2021. PMID: 34852455 Free article.
Analysis of nucleic acids extracted from rapid diagnostic tests reveals a significant proportion of false positive test results associated with recent malaria treatment.
Hosch S, Yoboue CA, Donfack OT, Guirou EA, Dangy JP, Mpina M, Nyakurungu E, Blöchliger K, Guerra CA, Phiri WP, Ayekaba MO, García GA, Tanner M, Daubenberger C, Schindler T. Hosch S, et al. Among authors: schindler t. Malar J. 2022 Jan 24;21(1):23. doi: 10.1186/s12936-022-04043-7. Malar J. 2022. PMID: 35073934 Free PMC article.
417 results