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Physics-driven structural docking and protein language models accelerate antibody screening and design for broad-spectrum antiviral therapy.
Almubarak HF, Tan W, Hoffmann AD, Wei J, El-Shennawy L, Squires JR, Sun Y, Dashzeveg NK, Simonton B, Jia Y, Iyer R, Xu Y, Nicolaescu V, Elli D, Randall GC, Schipma MJ, Swaminathan S, Ison MG, Liu H, Fang D, Shen Y. Almubarak HF, et al. Among authors: jia y. bioRxiv [Preprint]. 2024 Mar 4:2024.03.01.582176. doi: 10.1101/2024.03.01.582176. bioRxiv. 2024. PMID: 38496411 Free PMC article. Preprint.
Unique molecular signatures sustained in circulating monocytes and regulatory T cells in Convalescent COVID-19 patients.
Hoffmann AD, Weinberg SE, Swaminathan S, Chaudhuri S, Mubarak HF, Schipma MJ, Mao C, Wang X, El-Shennawy L, Dashzeveg NK, Wei J, Mehl PJ, Shihadah LJ, Wai CM, Ostiguin C, Jia Y, D'Amico P, Wang NR, Luo Y, Demonbreun AR, Ison MG, Liu H, Fang D. Hoffmann AD, et al. Among authors: jia y. bioRxiv [Preprint]. 2022 Mar 28:2022.03.26.485922. doi: 10.1101/2022.03.26.485922. bioRxiv. 2022. PMID: 35378753 Free PMC article. Updated. Preprint.
Computational ranking-assisted identification of Plexin-B2 in homotypic and heterotypic clustering of circulating tumor cells in breast cancer metastasis.
Schuster E, Dashzeveg N, Jia Y, Golam K, Zhang T, Hoffman A, Zhang Y, Zheng C, Ramos E, Taftaf R, Shennawy LE, Scholten D, Kitata RB, Adorno-Cruz V, Reduzzi C, Spahija S, Xu R, Siziopikou KP, Platanias LC, Shah A, Gradishar WJ, Cristofanilli M, Tsai CF, Shi T, Liu H. Schuster E, et al. Among authors: jia y. bioRxiv [Preprint]. 2023 Apr 12:2023.04.10.536233. doi: 10.1101/2023.04.10.536233. bioRxiv. 2023. PMID: 37090580 Free PMC article. Preprint.
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