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High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar.
Shi TL, Jia KH, Bao YT, Nie S, Tian XC, Yan XM, Chen ZY, Li ZC, Zhao SW, Ma HY, Zhao Y, Li X, Zhang RG, Guo J, Zhao W, El-Kassaby YA, Müller N, Van de Peer Y, Wang XR, Street NR, Porth I, An X, Mao JF. Shi TL, et al. Among authors: van de peer y. Plant Physiol. 2024 Apr 30;195(1):652-670. doi: 10.1093/plphys/kiae078. Plant Physiol. 2024. PMID: 38412470 Free PMC article.
Dissecting plant genomes with the PLAZA comparative genomics platform.
Van Bel M, Proost S, Wischnitzki E, Movahedi S, Scheerlinck C, Van de Peer Y, Vandepoele K. Van Bel M, et al. Among authors: van de peer y. Plant Physiol. 2012 Feb;158(2):590-600. doi: 10.1104/pp.111.189514. Epub 2011 Dec 23. Plant Physiol. 2012. PMID: 22198273 Free PMC article.
The Plant Genome Integrative Explorer Resource: PlantGenIE.org.
Sundell D, Mannapperuma C, Netotea S, Delhomme N, Lin YC, Sjödin A, Van de Peer Y, Jansson S, Hvidsten TR, Street NR. Sundell D, et al. Among authors: van de peer y. New Phytol. 2015 Dec;208(4):1149-56. doi: 10.1111/nph.13557. Epub 2015 Jul 20. New Phytol. 2015. PMID: 26192091 Free article.
Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies).
Delhomme N, Sundström G, Zamani N, Lantz H, Lin YC, Hvidsten TR, Höppner MP, Jern P, Van de Peer Y, Lundeberg J, Grabherr MG, Street NR. Delhomme N, et al. Among authors: van de peer y. PLoS One. 2015 Sep 28;10(9):e0139080. doi: 10.1371/journal.pone.0139080. eCollection 2015. PLoS One. 2015. PMID: 26413905 Free PMC article.
Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen.
Lin YC, Wang J, Delhomme N, Schiffthaler B, Sundström G, Zuccolo A, Nystedt B, Hvidsten TR, de la Torre A, Cossu RM, Hoeppner MP, Lantz H, Scofield DG, Zamani N, Johansson A, Mannapperuma C, Robinson KM, Mähler N, Leitch IJ, Pellicer J, Park EJ, Van Montagu M, Van de Peer Y, Grabherr M, Jansson S, Ingvarsson PK, Street NR. Lin YC, et al. Among authors: van montagu m, van de peer y, de la torre a. Proc Natl Acad Sci U S A. 2018 Nov 13;115(46):E10970-E10978. doi: 10.1073/pnas.1801437115. Epub 2018 Oct 29. Proc Natl Acad Sci U S A. 2018. PMID: 30373829 Free PMC article.
Genome sequence of Malania oleifera, a tree with great value for nervonic acid production.
Xu CQ, Liu H, Zhou SS, Zhang DX, Zhao W, Wang S, Chen F, Sun YQ, Nie S, Jia KH, Jiao SQ, Zhang RG, Yun QZ, Guan W, Wang X, Gao Q, Bennetzen JL, Maghuly F, Porth I, Van de Peer Y, Wang XR, Ma Y, Mao JF. Xu CQ, et al. Among authors: van de peer y. Gigascience. 2019 Feb 1;8(2):giy164. doi: 10.1093/gigascience/giy164. Gigascience. 2019. PMID: 30689848 Free PMC article.
Chromosome-level genome assembly of a parent species of widely cultivated azaleas.
Yang FS, Nie S, Liu H, Shi TL, Tian XC, Zhou SS, Bao YT, Jia KH, Guo JF, Zhao W, An N, Zhang RG, Yun QZ, Wang XZ, Mannapperuma C, Porth I, El-Kassaby YA, Street NR, Wang XR, Van de Peer Y, Mao JF. Yang FS, et al. Among authors: van de peer y. Nat Commun. 2020 Oct 19;11(1):5269. doi: 10.1038/s41467-020-18771-4. Nat Commun. 2020. PMID: 33077749 Free PMC article.
Haplotype-resolved genome assembly and allele-specific gene expression in cultivated ginger.
Cheng SP, Jia KH, Liu H, Zhang RG, Li ZC, Zhou SS, Shi TL, Ma AC, Yu CW, Gao C, Cao GL, Zhao W, Nie S, Guo JF, Jiao SQ, Tian XC, Yan XM, Bao YT, Yun QZ, Wang XZ, Porth I, El-Kassaby YA, Wang XR, Li Z, Van de Peer Y, Mao JF. Cheng SP, et al. Among authors: van de peer y. Hortic Res. 2021 Aug 5;8(1):188. doi: 10.1038/s41438-021-00599-8. Hortic Res. 2021. PMID: 34354050 Free PMC article.
471 results