Dai R - Search Results

1

CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution.

Wu CT, Du D, Chen L, Dai R, Liu C, Yu G, Bhardwaj S, Parker SJ, Zhang Z, Clarke R, Herrington DM, Wang Y. Wu CT, et al. Among authors: dai r. Bioinformatics. 2024 Mar 4;40(3):btae107. doi: 10.1093/bioinformatics/btae107. Bioinformatics. 2024. PMID: 38407991 Free PMC article.

2

BrainEXP: a database featuring with spatiotemporal expression variations and co-expression organizations in human brains.

Jiao C, Yan P, Xia C, Shen Z, Tan Z, Tan Y, Wang K, Jiang Y, Huang L, Dai R, Wei Y, Xia Y, Meng Q, Ouyang Y, Yi L, Duan F, Dai J, Zhao S, Liu C, Chen C. Jiao C, et al. Among authors: dai r, dai j. Bioinformatics. 2019 Jan 1;35(1):172-174. doi: 10.1093/bioinformatics/bty576. Bioinformatics. 2019. PMID: 29985970 Free PMC article.

3

Spatiotemporal specificity of correlated DNA methylation and gene expression pairs across different human tissues and stages of brain development.

Wang K, Dai R, Xia Y, Tian J, Jiao C, Mikhailova T, Zhang C, Chen C, Liu C. Wang K, et al. Among authors: dai r. Epigenetics. 2022 Oct;17(10):1110-1127. doi: 10.1080/15592294.2021.1993607. Epub 2021 Oct 21. Epigenetics. 2022. PMID: 34652256 Free PMC article.

4

swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution.

Chen L, Wu CT, Lin CH, Dai R, Liu C, Clarke R, Yu G, Van Eyk JE, Herrington DM, Wang Y. Chen L, et al. Among authors: dai r. Bioinformatics. 2022 Feb 7;38(5):1403-1410. doi: 10.1093/bioinformatics/btab839. Bioinformatics. 2022. PMID: 34904628 Free PMC article.

5

Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data.

Dai R, Chu T, Zhang M, Wang X, Jourdon A, Wu F, Mariani J, Vaccarino FM, Lee D, Fullard JF, Hoffman GE, Roussos P, Wang Y, Wang X, Pinto D, Wang SH, Zhang C; PsychENCODE consortium; Chen C, Liu C. Dai R, et al. bioRxiv [Preprint]. 2023 Mar 15:2023.03.13.532468. doi: 10.1101/2023.03.13.532468. bioRxiv. 2023. PMID: 36993743 Free PMC article. Preprint.

6

Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data.

Dai R, Chu T, Zhang M, Wang X, Jourdon A, Wu F, Mariani J, Vaccarino FM, Lee D, Fullard JF, Hoffman GE, Roussos P, Wang Y, Wang X, Pinto D, Wang SH, Zhang C; PsychENCODE consortium; Chen C, Liu C. Dai R, et al. Sci Adv. 2024 May 24;10(21):eadh2588. doi: 10.1126/sciadv.adh2588. Epub 2024 May 23. Sci Adv. 2024. PMID: 38781336 Free PMC article.

7

Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain.

Wen C, Margolis M, Dai R, Zhang P, Przytycki PF, Vo DD, Bhattacharya A, Matoba N, Tang M, Jiao C, Kim M, Tsai E, Hoh C, Aygün N, Walker RL, Chatzinakos C, Clarke D, Pratt H; PsychENCODE Consortium†; Peters MA, Gerstein M, Daskalakis NP, Weng Z, Jaffe AE, Kleinman JE, Hyde TM, Weinberger DR, Bray NJ, Sestan N, Geschwind DH, Roeder K, Gusev A, Pasaniuc B, Stein JL, Love MI, Pollard KS, Liu C, Gandal MJ; PsychENCODE Consortium. Wen C, et al. Among authors: dai r. Science. 2024 May 24;384(6698):eadh0829. doi: 10.1126/science.adh0829. Epub 2024 May 24. Science. 2024. PMID: 38781368

8

Positional effects revealed in Illumina methylation array and the impact on analysis.

Jiao C, Zhang C, Dai R, Xia Y, Wang K, Giase G, Chen C, Liu C. Jiao C, et al. Among authors: dai r. Epigenomics. 2018 May;10(5):643-659. doi: 10.2217/epi-2017-0105. Epub 2018 Feb 22. Epigenomics. 2018. PMID: 29469594 Free PMC article.

9

Integrative analyses prioritize GNL3 as a risk gene for bipolar disorder.

Meng Q, Wang L, Dai R, Wang J, Ren Z, Liu S, Xia Y, Jiang Y, Duan F, Wang K, Liu C, Chen C. Meng Q, et al. Among authors: dai r. Mol Psychiatry. 2020 Nov;25(11):2672-2684. doi: 10.1038/s41380-020-00866-5. Epub 2020 Aug 21. Mol Psychiatry. 2020. PMID: 32826963

10

Agonal Factors Distort Gene-Expression Patterns in Human Postmortem Brains.

Dai J, Chen Y, Dai R, Jiang Y, Tian J, Liu S, Xu M, Li M, Zhou J, Liu C, Chen C. Dai J, et al. Among authors: dai r. Front Neurosci. 2021 Mar 25;15:614142. doi: 10.3389/fnins.2021.614142. eCollection 2021. Front Neurosci. 2021. PMID: 33841074 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

1,745 results

Search Page