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Identifying metabolic shifts in Crohn's disease using' omics-driven contextualized computational metabolic network models.
Fernandes P, Sharma Y, Zulqarnain F, McGrew B, Shrivastava A, Ehsan L, Payne D, Dillard L, Powers D, Aldridge I, Matthews J, Kugathasan S, Fernández FM, Gaul D, Papin JA, Syed S. Fernandes P, et al. Among authors: papin ja. Sci Rep. 2023 Jan 5;13(1):203. doi: 10.1038/s41598-022-26816-5. Sci Rep. 2023. PMID: 36604447 Free PMC article.
Identifying metabolic adaptations characteristic of cardiotoxicity using paired transcriptomics and metabolomics data integrated with a computational model of heart metabolism.
Dougherty BV, Moore CJ, Rawls KD, Jenior ML, Chun B, Nagdas S, Saucerman JJ, Kolling GL, Wallqvist A, Papin JA. Dougherty BV, et al. Among authors: papin ja. PLoS Comput Biol. 2024 Feb 29;20(2):e1011919. doi: 10.1371/journal.pcbi.1011919. eCollection 2024 Feb. PLoS Comput Biol. 2024. PMID: 38422168 Free PMC article.
Enterococci enhance Clostridioides difficile pathogenesis.
Smith AB, Jenior ML, Keenan O, Hart JL, Specker J, Abbas A, Rangel PC, Di C, Green J, Bustin KA, Gaddy JA, Nicholson MR, Laut C, Kelly BJ, Matthews ML, Evans DR, Van Tyne D, Furth EE, Papin JA, Bushman FD, Erlichman J, Baldassano RN, Silverman MA, Dunny GM, Prentice BM, Skaar EP, Zackular JP. Smith AB, et al. Among authors: papin ja. Nature. 2022 Nov;611(7937):780-786. doi: 10.1038/s41586-022-05438-x. Epub 2022 Nov 16. Nature. 2022. PMID: 36385534 Free PMC article.
254 results