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Spatial and temporal metagenomics of river compartments reveals viral community dynamics in an urban impacted stream.
Rodríguez-Ramos J, Oliverio A, Borton MA, Danczak R, Mueller BM, Schulz H, Ellenbogen J, Flynn RM, Daly RA, Schopflin L, Shaffer M, Goldman A, Lewandowski J, Stegen JC, Wrighton KC. Rodríguez-Ramos J, et al. Among authors: daly ra. bioRxiv [Preprint]. 2023 Apr 4:2023.04.04.535500. doi: 10.1101/2023.04.04.535500. bioRxiv. 2023. PMID: 37066413 Free PMC article. Preprint.
A functional microbiome catalog crowdsourced from North American rivers.
Borton MA, McGivern BB, Willi KR, Woodcroft BJ, Mosier AC, Singleton DM, Bambakidis T, Pelly A, Liu F, Edirisinghe JN, Faria JP, Leleiwi I, Daly RA, Goldman AE, Wilkins MJ, Hall EK, Pennacchio C, Roux S, Eloe-Fadrosh EA, Good SP, Sullivan MB, Henry CS, Wood-Charlson EM, Ross MRV, Miller CS, Crump BC, Stegen JC, Wrighton KC. Borton MA, et al. Among authors: daly ra. bioRxiv [Preprint]. 2023 Jul 26:2023.07.22.550117. doi: 10.1101/2023.07.22.550117. bioRxiv. 2023. PMID: 37502915 Free PMC article. Preprint.
Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments.
Rodríguez-Ramos JA, Borton MA, McGivern BB, Smith GJ, Solden LM, Shaffer M, Daly RA, Purvine SO, Nicora CD, Eder EK, Lipton M, Hoyt DW, Stegen JC, Wrighton KC. Rodríguez-Ramos JA, et al. Among authors: daly ra. mSystems. 2022 Aug 30;7(4):e0051622. doi: 10.1128/msystems.00516-22. Epub 2022 Jul 21. mSystems. 2022. PMID: 35861508 Free PMC article.
68 results