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Immunostimulation of Fibrous Nucleic Acid Nanoparticles Can be Modulated through Aptamer-Based Functional Moieties: Unveiling the Structure-Activity Relationship and Mechanistic Insights.
Rebolledo LP, Ke W, Cedrone E, Wang J, Majithia K, Johnson MB, Dokholyan NV, Dobrovolskaia MA, Afonin KA. Rebolledo LP, et al. Among authors: dokholyan nv. ACS Appl Mater Interfaces. 2024 Feb 21;16(7):8430-8441. doi: 10.1021/acsami.3c17779. Epub 2024 Feb 12. ACS Appl Mater Interfaces. 2024. PMID: 38344840 Free PMC article.
RNA-DNA fibers and polygons with controlled immunorecognition activate RNAi, FRET and transcriptional regulation of NF-κB in human cells.
Ke W, Hong E, Saito RF, Rangel MC, Wang J, Viard M, Richardson M, Khisamutdinov EF, Panigaj M, Dokholyan NV, Chammas R, Dobrovolskaia MA, Afonin KA. Ke W, et al. Among authors: dokholyan nv. Nucleic Acids Res. 2019 Feb 20;47(3):1350-1361. doi: 10.1093/nar/gky1215. Nucleic Acids Res. 2019. PMID: 30517685 Free PMC article.
RNA Fibers as Optimized Nanoscaffolds for siRNA Coordination and Reduced Immunological Recognition.
Rackley L, Stewart JM, Salotti J, Krokhotin A, Shah A, Halman JR, Juneja R, Smollett J, Lee L, Roark K, Viard M, Tarannum M, Vivero-Escoto J, Johnson PF, Dobrovolskaia MA, Dokholyan NV, Franco E, Afonin KA. Rackley L, et al. Among authors: dokholyan nv. Adv Funct Mater. 2018 Nov 28;28(48):1805959. doi: 10.1002/adfm.201805959. Epub 2018 Oct 9. Adv Funct Mater. 2018. PMID: 31258458 Free PMC article.
Mapping allosteric communications within individual proteins.
Wang J, Jain A, McDonald LR, Gambogi C, Lee AL, Dokholyan NV. Wang J, et al. Among authors: dokholyan nv. Nat Commun. 2020 Jul 31;11(1):3862. doi: 10.1038/s41467-020-17618-2. Nat Commun. 2020. PMID: 32737291 Free PMC article.
GPU-Accelerated Flexible Molecular Docking.
Fan M, Wang J, Jiang H, Feng Y, Mahdavi M, Madduri K, Kandemir MT, Dokholyan NV. Fan M, et al. Among authors: dokholyan nv. J Phys Chem B. 2021 Feb 4;125(4):1049-1060. doi: 10.1021/acs.jpcb.0c09051. Epub 2021 Jan 26. J Phys Chem B. 2021. PMID: 33497567 Free PMC article.
328 results