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Ultra-fast label-free quantification and comprehensive proteome coverage with narrow-window data-independent acquisition.
Guzman UH, Martinez-Val A, Ye Z, Damoc E, Arrey TN, Pashkova A, Renuse S, Denisov E, Petzoldt J, Peterson AC, Harking F, Østergaard O, Rydbirk R, Aznar S, Stewart H, Xuan Y, Hermanson D, Horning S, Hock C, Makarov A, Zabrouskov V, Olsen JV. Guzman UH, et al. Among authors: zabrouskov v. Nat Biotechnol. 2024 Feb 1. doi: 10.1038/s41587-023-02099-7. Online ahead of print. Nat Biotechnol. 2024. PMID: 38302753
Multiplexed MS/MS for improved data-independent acquisition.
Egertson JD, Kuehn A, Merrihew GE, Bateman NW, MacLean BX, Ting YS, Canterbury JD, Marsh DM, Kellmann M, Zabrouskov V, Wu CC, MacCoss MJ. Egertson JD, et al. Among authors: zabrouskov v. Nat Methods. 2013 Aug;10(8):744-6. doi: 10.1038/nmeth.2528. Epub 2013 Jun 23. Nat Methods. 2013. PMID: 23793237 Free PMC article.
Novel parallelized quadrupole/linear ion trap/Orbitrap tribrid mass spectrometer improving proteome coverage and peptide identification rates.
Senko MW, Remes PM, Canterbury JD, Mathur R, Song Q, Eliuk SM, Mullen C, Earley L, Hardman M, Blethrow JD, Bui H, Specht A, Lange O, Denisov E, Makarov A, Horning S, Zabrouskov V. Senko MW, et al. Among authors: zabrouskov v. Anal Chem. 2013 Dec 17;85(24):11710-4. doi: 10.1021/ac403115c. Epub 2013 Nov 27. Anal Chem. 2013. PMID: 24251866
Multiplexed mass spectrometry of individual ions improves measurement of proteoforms and their complexes.
Kafader JO, Melani RD, Durbin KR, Ikwuagwu B, Early BP, Fellers RT, Beu SC, Zabrouskov V, Makarov AA, Maze JT, Shinholt DL, Yip PF, Tullman-Ercek D, Senko MW, Compton PD, Kelleher NL. Kafader JO, et al. Among authors: zabrouskov v. Nat Methods. 2020 Apr;17(4):391-394. doi: 10.1038/s41592-020-0764-5. Epub 2020 Mar 2. Nat Methods. 2020. PMID: 32123391 Free PMC article.
Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data Independent Acquisition.
Heil LR, Damoc E, Arrey TN, Pashkova A, Denisov E, Petzoldt J, Peterson AC, Hsu C, Searle BC, Shulman N, Riffle M, Connolly B, MacLean BX, Remes PM, Senko MW, Stewart HI, Hock C, Makarov AA, Hermanson D, Zabrouskov V, Wu CC, MacCoss MJ. Heil LR, et al. Among authors: zabrouskov v. bioRxiv [Preprint]. 2023 Aug 7:2023.06.03.543570. doi: 10.1101/2023.06.03.543570. bioRxiv. 2023. PMID: 37398334 Free PMC article. Updated. Preprint.
Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data-Independent Acquisition.
Heil LR, Damoc E, Arrey TN, Pashkova A, Denisov E, Petzoldt J, Peterson AC, Hsu C, Searle BC, Shulman N, Riffle M, Connolly B, MacLean BX, Remes PM, Senko MW, Stewart HI, Hock C, Makarov AA, Hermanson D, Zabrouskov V, Wu CC, MacCoss MJ. Heil LR, et al. Among authors: zabrouskov v. J Proteome Res. 2023 Oct 6;22(10):3290-3300. doi: 10.1021/acs.jproteome.3c00357. Epub 2023 Sep 8. J Proteome Res. 2023. PMID: 37683181 Free PMC article.
Parallelized Acquisition of Orbitrap and Astral Analyzers Enables High-Throughput Quantitative Analysis.
Stewart HI, Grinfeld D, Giannakopulos A, Petzoldt J, Shanley T, Garland M, Denisov E, Peterson AC, Damoc E, Zeller M, Arrey TN, Pashkova A, Renuse S, Hakimi A, Kühn A, Biel M, Kreutzmann A, Hagedorn B, Colonius I, Schütz A, Stefes A, Dwivedi A, Mourad D, Hoek M, Reitemeier B, Cochems P, Kholomeev A, Ostermann R, Quiring G, Ochmann M, Möhring S, Wagner A, Petker A, Kanngiesser S, Wiedemeyer M, Balschun W, Hermanson D, Zabrouskov V, Makarov AA, Hock C. Stewart HI, et al. Among authors: zabrouskov v. Anal Chem. 2023 Oct 24;95(42):15656-15664. doi: 10.1021/acs.analchem.3c02856. Epub 2023 Oct 10. Anal Chem. 2023. PMID: 37815927 Free PMC article.
Fast and Deep Phosphoproteome Analysis with the Orbitrap Astral Mass Spectrometer.
Lancaster NM, Sinitcyn P, Forny P, Peters-Clarke TM, Fecher C, Smith AJ, Shishkova E, Arrey TN, Pashkova A, Robinson ML, Arp N, Fan J, Hansen J, Galmozzi A, Serrano LR, Rojas J, Gasch AP, Westphall MS, Stewart H, Hock C, Damoc E, Pagliarini DJ, Zabrouskov V, Coon JJ. Lancaster NM, et al. Among authors: zabrouskov v. bioRxiv [Preprint]. 2024 May 16:2023.11.21.568149. doi: 10.1101/2023.11.21.568149. bioRxiv. 2024. PMID: 38045259 Free PMC article. Preprint.
The One Hour Human Proteome.
Serrano LR, Peters-Clarke TM, Arrey TN, Damoc E, Robinson ML, Lancaster NM, Shishkova E, Moss C, Pashkova A, Sinitcyn P, Brademan DR, Quarmby ST, Peterson AC, Zeller M, Hermanson D, Stewart H, Hock C, Makarov A, Zabrouskov V, Coon JJ. Serrano LR, et al. Among authors: zabrouskov v. Mol Cell Proteomics. 2024 May;23(5):100760. doi: 10.1016/j.mcpro.2024.100760. Epub 2024 Apr 3. Mol Cell Proteomics. 2024. PMID: 38579929 Free PMC article.
57 results