Ferguson-Smith AC - Search Results

1

Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet.

Viner C, Ishak CA, Johnson J, Walker NJ, Shi H, Sjöberg-Herrera MK, Shen SY, Lardo SM, Adams DJ, Ferguson-Smith AC, De Carvalho DD, Hainer SJ, Bailey TL, Hoffman MM. Viner C, et al. Among authors: ferguson smith ac. Genome Biol. 2024 Jan 8;25(1):11. doi: 10.1186/s13059-023-03070-0. Genome Biol. 2024. PMID: 38191487 Free PMC article.

2

Allele-specific binding of ZFP57 in the epigenetic regulation of imprinted and non-imprinted monoallelic expression.

Strogantsev R, Krueger F, Yamazawa K, Shi H, Gould P, Goldman-Roberts M, McEwen K, Sun B, Pedersen R, Ferguson-Smith AC. Strogantsev R, et al. Genome Biol. 2015 May 30;16(1):112. doi: 10.1186/s13059-015-0672-7. Genome Biol. 2015. PMID: 26025256 Free PMC article.

3

Identification, Characterization, and Heritability of Murine Metastable Epialleles: Implications for Non-genetic Inheritance.

Kazachenka A, Bertozzi TM, Sjoberg-Herrera MK, Walker N, Gardner J, Gunning R, Pahita E, Adams S, Adams D, Ferguson-Smith AC. Kazachenka A, et al. Cell. 2018 Nov 15;175(5):1259-1271.e13. doi: 10.1016/j.cell.2018.09.043. Epub 2018 Oct 25. Cell. 2018. PMID: 30454646 Free PMC article.

4

Targeted deletion of a 170-kb cluster of LINE-1 repeats and implications for regional control.

Soares ML, Edwards CA, Dearden FL, Ferrón SR, Curran S, Corish JA, Rancourt RC, Allen SE, Charalambous M, Ferguson-Smith MA, Rens W, Adams DJ, Ferguson-Smith AC. Soares ML, et al. Genome Res. 2018 Jan 24;28(3):345-56. doi: 10.1101/gr.221366.117. Online ahead of print. Genome Res. 2018. PMID: 29367313 Free PMC article.

5

Jdp2 downregulates Trp53 transcription to promote leukaemogenesis in the context of Trp53 heterozygosity.

van der Weyden L, Rust AG, McIntyre RE, Robles-Espinoza CD, del Castillo Velasco-Herrera M, Strogantsev R, Ferguson-Smith AC, McCarthy S, Keane TM, Arends MJ, Adams DJ. van der Weyden L, et al. Oncogene. 2013 Jan 17;32(3):397-402. doi: 10.1038/onc.2012.56. Epub 2012 Feb 27. Oncogene. 2013. PMID: 22370638 Free PMC article.

6

Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci.

Lilue J, Doran AG, Fiddes IT, Abrudan M, Armstrong J, Bennett R, Chow W, Collins J, Collins S, Czechanski A, Danecek P, Diekhans M, Dolle DD, Dunn M, Durbin R, Earl D, Ferguson-Smith A, Flicek P, Flint J, Frankish A, Fu B, Gerstein M, Gilbert J, Goodstadt L, Harrow J, Howe K, Ibarra-Soria X, Kolmogorov M, Lelliott CJ, Logan DW, Loveland J, Mathews CE, Mott R, Muir P, Nachtweide S, Navarro FCP, Odom DT, Park N, Pelan S, Pham SK, Quail M, Reinholdt L, Romoth L, Shirley L, Sisu C, Sjoberg-Herrera M, Stanke M, Steward C, Thomas M, Threadgold G, Thybert D, Torrance J, Wong K, Wood J, Yalcin B, Yang F, Adams DJ, Paten B, Keane TM. Lilue J, et al. Nat Genet. 2018 Nov;50(11):1574-1583. doi: 10.1038/s41588-018-0223-8. Epub 2018 Oct 1. Nat Genet. 2018. PMID: 30275530 Free PMC article.

7

Identification, Characterization, and Heritability of Murine Metastable Epialleles: Implications for Non-genetic Inheritance.

Kazachenka A, Bertozzi TM, Sjoberg-Herrera MK, Walker N, Gardner J, Gunning R, Pahita E, Adams S, Adams D, Ferguson-Smith AC. Kazachenka A, et al. Cell. 2018 Nov 29;175(6):1717. doi: 10.1016/j.cell.2018.11.017. Cell. 2018. PMID: 30500541 Free PMC article. No abstract available.

8

ZFP57 regulation of transposable elements and gene expression within and beyond imprinted domains.

Shi H, Strogantsev R, Takahashi N, Kazachenka A, Lorincz MC, Hemberger M, Ferguson-Smith AC. Shi H, et al. Epigenetics Chromatin. 2019 Aug 9;12(1):49. doi: 10.1186/s13072-019-0295-4. Epigenetics Chromatin. 2019. PMID: 31399135 Free PMC article.

9

Simulation-based benchmarking of isoform quantification in single-cell RNA-seq.

Westoby J, Herrera MS, Ferguson-Smith AC, Hemberg M. Westoby J, et al. Genome Biol. 2018 Nov 7;19(1):191. doi: 10.1186/s13059-018-1571-5. Genome Biol. 2018. PMID: 30404663 Free PMC article.

10

ZNF445 is a primary regulator of genomic imprinting.

Takahashi N, Coluccio A, Thorball CW, Planet E, Shi H, Offner S, Turelli P, Imbeault M, Ferguson-Smith AC, Trono D. Takahashi N, et al. Genes Dev. 2019 Jan 1;33(1-2):49-54. doi: 10.1101/gad.320069.118. Genes Dev. 2019. PMID: 30602440 Free PMC article.

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