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Pericentric chromatin loops function as a nonlinear spring in mitotic force balance.
Stephens AD, Haggerty RA, Vasquez PA, Vicci L, Snider CE, Shi F, Quammen C, Mullins C, Haase J, Taylor RM 2nd, Verdaasdonk JS, Falvo MR, Jin Y, Forest MG, Bloom K. Stephens AD, et al. Among authors: forest mg. J Cell Biol. 2013 Mar 18;200(6):757-72. doi: 10.1083/jcb.201208163. J Cell Biol. 2013. PMID: 23509068 Free PMC article.
Centromere tethering confines chromosome domains.
Verdaasdonk JS, Vasquez PA, Barry RM, Barry T, Goodwin S, Forest MG, Bloom K. Verdaasdonk JS, et al. Among authors: forest mg. Mol Cell. 2013 Dec 26;52(6):819-31. doi: 10.1016/j.molcel.2013.10.021. Epub 2013 Nov 21. Mol Cell. 2013. PMID: 24268574 Free PMC article.
DNA loops generate intracentromere tension in mitosis.
Lawrimore J, Vasquez PA, Falvo MR, Taylor RM 2nd, Vicci L, Yeh E, Forest MG, Bloom K. Lawrimore J, et al. Among authors: forest mg. J Cell Biol. 2015 Aug 17;210(4):553-64. doi: 10.1083/jcb.201502046. J Cell Biol. 2015. PMID: 26283798 Free PMC article.
Entropy gives rise to topologically associating domains.
Vasquez PA, Hult C, Adalsteinsson D, Lawrimore J, Forest MG, Bloom K. Vasquez PA, et al. Among authors: forest mg. Nucleic Acids Res. 2016 Jul 8;44(12):5540-9. doi: 10.1093/nar/gkw510. Epub 2016 Jun 2. Nucleic Acids Res. 2016. PMID: 27257057 Free PMC article.
Transient crosslinking kinetics optimize gene cluster interactions.
Walker B, Taylor D, Lawrimore J, Hult C, Adalsteinsson D, Bloom K, Forest MG. Walker B, et al. Among authors: forest mg. PLoS Comput Biol. 2019 Aug 21;15(8):e1007124. doi: 10.1371/journal.pcbi.1007124. eCollection 2019 Aug. PLoS Comput Biol. 2019. PMID: 31433796 Free PMC article.
Statistical mechanics of chromosomes: in vivo and in silico approaches reveal high-level organization and structure arise exclusively through mechanical feedback between loop extruders and chromatin substrate properties.
He Y, Lawrimore J, Cook D, Van Gorder EE, De Larimat SC, Adalsteinsson D, Forest MG, Bloom K. He Y, et al. Among authors: forest mg. Nucleic Acids Res. 2020 Nov 18;48(20):11284-11303. doi: 10.1093/nar/gkaa871. Nucleic Acids Res. 2020. PMID: 33080019 Free PMC article.
231 results