Yasuda I - Search Results

1

Unsupervised deep learning for molecular dynamics simulations: a novel analysis of protein-ligand interactions in SARS-CoV-2 M^pro.

Mustali J, Yasuda I, Hirano Y, Yasuoka K, Gautieri A, Arai N. Mustali J, et al. Among authors: yasuda i. RSC Adv. 2023 Nov 22;13(48):34249-34261. doi: 10.1039/d3ra06375e. eCollection 2023 Nov 16. RSC Adv. 2023. PMID: 38019981 Free PMC article.

2

Differences in ligand-induced protein dynamics extracted from an unsupervised deep learning approach correlate with protein-ligand binding affinities.

Yasuda I, Endo K, Yamamoto E, Hirano Y, Yasuoka K. Yasuda I, et al. Commun Biol. 2022 May 19;5(1):481. doi: 10.1038/s42003-022-03416-7. Commun Biol. 2022. PMID: 35589949 Free PMC article.

3

Combining Molecular Dynamics and Machine Learning to Analyze Shear Thinning for Alkane and Globular Lubricants in the Low Shear Regime.

Yasuda I, Kobayashi Y, Endo K, Hayakawa Y, Fujiwara K, Yajima K, Arai N, Yasuoka K. Yasuda I, et al. ACS Appl Mater Interfaces. 2023 Feb 15;15(6):8567-8578. doi: 10.1021/acsami.2c16366. Epub 2023 Jan 30. ACS Appl Mater Interfaces. 2023. PMID: 36715349

4

Graph-Neural-Network-Based Unsupervised Learning of the Temporal Similarity of Structural Features Observed in Molecular Dynamics Simulations.

Ishiai S, Yasuda I, Endo K, Yasuoka K. Ishiai S, et al. Among authors: yasuda i. J Chem Theory Comput. 2024 Jan 23;20(2):819-831. doi: 10.1021/acs.jctc.3c00995. Epub 2024 Jan 8. J Chem Theory Comput. 2024. PMID: 38190503

5

Combined treatment of Japanese spotted fever with tetracycline and fluoroquinolone requires careful evaluation using robust outcomes both in terms of its advantages and disadvantages.

Yasuda I, Sando E. Yasuda I, et al. Int J Antimicrob Agents. 2024 May 18:107201. doi: 10.1016/j.ijantimicag.2024.107201. Online ahead of print. Int J Antimicrob Agents. 2024. PMID: 38768739 No abstract available.

6

Drainage for fluid collections post pancreatic surgery and acute pancreatitis: similar but different?

Nakai Y, Matsubara S, Mukai T, Hamada T, Sasaki T, Ishiwatari H, Hijioka S, Shiomi H, Takenaka M, Iwashita T, Masuda A, Saito T, Isayama H, Yasuda I; WONDERFUL study group in Japan. Nakai Y, et al. Among authors: yasuda i. Clin Endosc. 2024 May 17. doi: 10.5946/ce.2023.254. Online ahead of print. Clin Endosc. 2024. PMID: 38756067 Free article. Review.

7

[A case of small intestinal endometriosis with bowel obstruction and perforation].

Kitamura K, Shinagawa K, Tokunaga M, Kobayashi S, Ueda A, Tokimitsu Y, Okada K, Maeda Y, Shibahara K, Yasuda I. Kitamura K, et al. Among authors: yasuda i. Nihon Shokakibyo Gakkai Zasshi. 2024;121(5):400-406. doi: 10.11405/nisshoshi.121.400. Nihon Shokakibyo Gakkai Zasshi. 2024. PMID: 38735748 Japanese.

8

Peroral Pancreatoscopy-Guided Lithotripsy Compared with Extracorporeal Shock Wave Lithotripsy in the Management of Pancreatic Duct Stones in Chronic Pancreatitis: A Multicenter Retrospective Cohort Study.

Iwata K, Iwashita T, Mukai T, Iwasa Y, Okuno M, Yoshida K, Maruta A, Uemura S, Yasuda I, Shimizu M. Iwata K, et al. Among authors: yasuda i. Diagnostics (Basel). 2024 Apr 24;14(9):891. doi: 10.3390/diagnostics14090891. Diagnostics (Basel). 2024. PMID: 38732306 Free PMC article.

9

Correction: Unique characteristics of new complete blood count parameters, the Immature Platelet Fraction and the Immature Platelet Fraction Count, in dengue patients.

Yasuda I, Saito N, Suzuki M, Umipig DV, Solante RM, Guzman F, Sayo AR, Yasunami M, Koizumi N, Kitashoji E, Sakashita K, Sheng Ng CF, Smith C, Ariyoshi K. Yasuda I, et al. PLoS One. 2024 May 2;19(5):e0303463. doi: 10.1371/journal.pone.0303463. eCollection 2024. PLoS One. 2024. PMID: 38696521 Free PMC article.

10

Evaluation of cytokine profiles related to Mycobacterium tuberculosis latent antigens using a whole-blood assay in the Philippines.

Yasuda I, Saludar NRD, Sayo AR, Suzuki S, Yokoyama A, Ozeki Y, Kobayashi H, Nishiyama A, Matsumoto S, Cox SE, Tanaka T, Yamashita Y. Yasuda I, et al. Front Immunol. 2024 Apr 10;15:1330796. doi: 10.3389/fimmu.2024.1330796. eCollection 2024. Front Immunol. 2024. PMID: 38665909 Free PMC article.

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