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Genomic analysis of Plasmodium vivax describes patterns of connectivity and putative drivers of adaptation in Ethiopia.
Kebede AM, Sutanto E, Trimarsanto H, Benavente ED, Barnes M, Pearson RD, Siegel SV, Erko B, Assefa A, Getachew S, Aseffa A, Petros B, Lo E, Mohammed R, Yilma D, Rumaseb A, Nosten F, Noviyanti R, Rayner JC, Kwiatkowski DP, Price RN, Golassa L, Auburn S. Kebede AM, et al. Among authors: benavente ed. Sci Rep. 2023 Nov 27;13(1):20788. doi: 10.1038/s41598-023-47889-w. Sci Rep. 2023. PMID: 38012191 Free PMC article.
Genomics of Plasmodium vivax in Colombia reveals evidence of local bottle-necking and inter-country connectivity in the Americas.
Sutanto E, Pava Z, Echeverry DF, Lopera-Mesa TM, Montenegro LM, Yasnot-Acosta MF, Benavente ED, Pearson RD, Herrera S, Arévalo-Herrera M, Trimarsanto H, Rumaseb A, Noviyanti R, Kwiatkowski DP, Price RN, Auburn S. Sutanto E, et al. Among authors: benavente ed. Sci Rep. 2023 Nov 13;13(1):19779. doi: 10.1038/s41598-023-46076-1. Sci Rep. 2023. PMID: 37957271 Free PMC article.
Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics.
Auburn S, Benavente ED, Miotto O, Pearson RD, Amato R, Grigg MJ, Barber BE, William T, Handayuni I, Marfurt J, Trimarsanto H, Noviyanti R, Sriprawat K, Nosten F, Campino S, Clark TG, Anstey NM, Kwiatkowski DP, Price RN. Auburn S, et al. Among authors: benavente ed. Nat Commun. 2018 Jul 3;9(1):2585. doi: 10.1038/s41467-018-04965-4. Nat Commun. 2018. PMID: 29968722 Free PMC article.
VivaxGEN: An open access platform for comparative analysis of short tandem repeat genotyping data in Plasmodium vivax populations.
Trimarsanto H, Benavente ED, Noviyanti R, Utami RA, Trianty L, Pava Z, Getachew S, Kim JY, Goo YK, Wangchuck S, Liu Y, Gao Q, Dowd S, Cheng Q, Clark TG, Price RN, Auburn S. Trimarsanto H, et al. Among authors: benavente ed. PLoS Negl Trop Dis. 2017 Mar 31;11(3):e0005465. doi: 10.1371/journal.pntd.0005465. eCollection 2017 Mar. PLoS Negl Trop Dis. 2017. PMID: 28362818 Free PMC article.
Whole genome sequencing of amplified Plasmodium knowlesi DNA from unprocessed blood reveals genetic exchange events between Malaysian Peninsular and Borneo subpopulations.
Benavente ED, Gomes AR, De Silva JR, Grigg M, Walker H, Barber BE, William T, Yeo TW, de Sessions PF, Ramaprasad A, Ibrahim A, Charleston J, Hibberd ML, Pain A, Moon RW, Auburn S, Ling LY, Anstey NM, Clark TG, Campino S. Benavente ED, et al. Sci Rep. 2019 Jul 8;9(1):9873. doi: 10.1038/s41598-019-46398-z. Sci Rep. 2019. PMID: 31285495 Free PMC article.
Distinctive genetic structure and selection patterns in Plasmodium vivax from South Asia and East Africa.
Benavente ED, Manko E, Phelan J, Campos M, Nolder D, Fernandez D, Velez-Tobon G, Castaño AT, Dombrowski JG, Marinho CRF, Aguiar ACC, Pereira DB, Sriprawat K, Nosten F, Moon R, Sutherland CJ, Campino S, Clark TG. Benavente ED, et al. Nat Commun. 2021 May 26;12(1):3160. doi: 10.1038/s41467-021-23422-3. Nat Commun. 2021. PMID: 34039976 Free PMC article.
A forward genetic screen reveals a primary role for Plasmodium falciparum Reticulocyte Binding Protein Homologue 2a and 2b in determining alternative erythrocyte invasion pathways.
Campino S, Marin-Menendez A, Kemp A, Cross N, Drought L, Otto TD, Benavente ED, Ravenhall M, Schwach F, Girling G, Manske M, Theron M, Gould K, Drury E, Clark TG, Kwiatkowski DP, Pance A, Rayner JC. Campino S, et al. Among authors: benavente ed. PLoS Pathog. 2018 Nov 29;14(11):e1007436. doi: 10.1371/journal.ppat.1007436. eCollection 2018 Nov. PLoS Pathog. 2018. PMID: 30496294 Free PMC article.
Genomic variation in two gametocyte non-producing Plasmodium falciparum clonal lines.
Campino S, Benavente ED, Assefa S, Thompson E, Drought LG, Taylor CJ, Gorvett Z, Carret CK, Flueck C, Ivens AC, Kwiatkowski DP, Alano P, Baker DA, Clark TG. Campino S, et al. Among authors: benavente ed. Malar J. 2016 Apr 21;15:229. doi: 10.1186/s12936-016-1254-1. Malar J. 2016. PMID: 27098483 Free PMC article.
Characterizing the impact of sustained sulfadoxine/pyrimethamine use upon the Plasmodium falciparum population in Malawi.
Ravenhall M, Benavente ED, Mipando M, Jensen AT, Sutherland CJ, Roper C, Sepúlveda N, Kwiatkowski DP, Montgomery J, Phiri KS, Terlouw A, Craig A, Campino S, Ocholla H, Clark TG. Ravenhall M, et al. Among authors: benavente ed. Malar J. 2016 Nov 29;15(1):575. doi: 10.1186/s12936-016-1634-6. Malar J. 2016. PMID: 27899115 Free PMC article.
Population-based genomic study of Plasmodium vivax malaria in seven Brazilian states and across South America.
Ibrahim A, Manko E, Dombrowski JG, Campos M, Benavente ED, Nolder D, Sutherland CJ, Nosten F, Fernandez D, Vélez-Tobón G, Castaño AT, Aguiar ACC, Pereira DB, da Silva Santos S, Suarez-Mutis M, Di Santi SM, Regina de Souza Baptista A, Dantas Machado RL, Marinho CRF, Clark TG, Campino S. Ibrahim A, et al. Among authors: benavente ed. Lancet Reg Health Am. 2023 Jan 2;18:100420. doi: 10.1016/j.lana.2022.100420. eCollection 2023 Feb. Lancet Reg Health Am. 2023. PMID: 36844008 Free PMC article.
39 results