Marcatili P - Search Results

1

Variability analysis of LC-MS experimental factors and their impact on machine learning.

Rehfeldt TG, Krawczyk K, Echers SG, Marcatili P, Palczynski P, Röttger R, Schwämmle V. Rehfeldt TG, et al. Among authors: marcatili p. Gigascience. 2022 Dec 28;12:giad096. doi: 10.1093/gigascience/giad096. Epub 2023 Nov 20. Gigascience. 2022. PMID: 37983748 Free PMC article.

2

Data mining patented antibody sequences.

Krawczyk K, Buchanan A, Marcatili P. Krawczyk K, et al. Among authors: marcatili p. MAbs. 2021 Jan-Dec;13(1):1892366. doi: 10.1080/19420862.2021.1892366. MAbs. 2021. PMID: 33722161 Free PMC article.

3

NetSurfP-2.0: Improved prediction of protein structural features by integrated deep learning.

Klausen MS, Jespersen MC, Nielsen H, Jensen KK, Jurtz VI, Sønderby CK, Sommer MOA, Winther O, Nielsen M, Petersen B, Marcatili P. Klausen MS, et al. Among authors: marcatili p. Proteins. 2019 Jun;87(6):520-527. doi: 10.1002/prot.25674. Epub 2019 Mar 9. Proteins. 2019. PMID: 30785653

4

AnOxPePred: using deep learning for the prediction of antioxidative properties of peptides.

Olsen TH, Yesiltas B, Marin FI, Pertseva M, García-Moreno PJ, Gregersen S, Overgaard MT, Jacobsen C, Lund O, Hansen EB, Marcatili P. Olsen TH, et al. Among authors: marcatili p. Sci Rep. 2020 Dec 8;10(1):21471. doi: 10.1038/s41598-020-78319-w. Sci Rep. 2020. PMID: 33293615 Free PMC article.

5

NetSurfP-3.0: accurate and fast prediction of protein structural features by protein language models and deep learning.

Høie MH, Kiehl EN, Petersen B, Nielsen M, Winther O, Nielsen H, Hallgren J, Marcatili P. Høie MH, et al. Among authors: marcatili p. Nucleic Acids Res. 2022 Jul 5;50(W1):W510-W515. doi: 10.1093/nar/gkac439. Nucleic Acids Res. 2022. PMID: 35648435 Free PMC article.

6

BepiPred-3.0: Improved B-cell epitope prediction using protein language models.

Clifford JN, Høie MH, Deleuran S, Peters B, Nielsen M, Marcatili P. Clifford JN, et al. Among authors: marcatili p. Protein Sci. 2022 Dec;31(12):e4497. doi: 10.1002/pro.4497. Protein Sci. 2022. PMID: 36366745 Free PMC article.

7

Modeled Structure of the Cell Envelope Proteinase of Lactococcus lactis.

Hansen EB, Marcatili P. Hansen EB, et al. Among authors: marcatili p. Front Bioeng Biotechnol. 2020 Dec 22;8:613986. doi: 10.3389/fbioe.2020.613986. eCollection 2020. Front Bioeng Biotechnol. 2020. PMID: 33415101 Free PMC article.

8

T Cell Epitope Prediction and Its Application to Immunotherapy.

Schaap-Johansen AL, Vujović M, Borch A, Hadrup SR, Marcatili P. Schaap-Johansen AL, et al. Among authors: marcatili p. Front Immunol. 2021 Sep 15;12:712488. doi: 10.3389/fimmu.2021.712488. eCollection 2021. Front Immunol. 2021. PMID: 34603286 Free PMC article. Review.

9

Biofunctionality of Enzymatically Derived Peptides from Codfish (Gadus morhua) Frame: Bulk In Vitro Properties, Quantitative Proteomics, and Bioinformatic Prediction.

Jafarpour A, Gregersen S, Marciel Gomes R, Marcatili P, Hegelund Olsen T, Jacobsen C, Overgaard MT, Sørensen AM. Jafarpour A, et al. Among authors: marcatili p. Mar Drugs. 2020 Nov 27;18(12):599. doi: 10.3390/md18120599. Mar Drugs. 2020. PMID: 33260992 Free PMC article.

10

Immunoglobulin G structure and rheumatoid factor epitopes.

Maibom-Thomsen SL, Trier NH, Holm BE, Hansen KB, Rasmussen MI, Chailyan A, Marcatili P, Højrup P, Houen G. Maibom-Thomsen SL, et al. Among authors: marcatili p. PLoS One. 2019 Jun 14;14(6):e0217624. doi: 10.1371/journal.pone.0217624. eCollection 2019. PLoS One. 2019. PMID: 31199818 Free PMC article.

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