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A laboratory framework for ongoing optimization of amplification-based genomic surveillance programs.
Lam C, Johnson-Mackinnon J, Basile K, Fong W, Suster CJ, Gall M, Agius J, Chandra S, Draper J, Martinez E, Drew A, Wang Q, Chen SC, Kok J, Dwyer DE, Sintchenko V, Rockett RJ. Lam C, et al. Among authors: basile k. Microbiol Spectr. 2023 Dec 12;11(6):e0220223. doi: 10.1128/spectrum.02202-23. Epub 2023 Nov 15. Microbiol Spectr. 2023. PMID: 37966271 Free PMC article.
SARS-CoV-2 Within-Host and in vitro Genomic Variability and Sub-Genomic RNA Levels Indicate Differences in Viral Expression Between Clinical Cohorts and in vitro Culture.
Agius JE, Johnson-Mackinnon JC, Fong W, Gall M, Lam C, Basile K, Kok J, Arnott A, Sintchenko V, Rockett RJ. Agius JE, et al. Among authors: basile k. Front Microbiol. 2022 May 19;13:824217. doi: 10.3389/fmicb.2022.824217. eCollection 2022. Front Microbiol. 2022. PMID: 35663867 Free PMC article.
Zika virus: what, where from and where to?
Basile K, Kok J, Dwyer DE. Basile K, et al. Pathology. 2017 Dec;49(7):698-706. doi: 10.1016/j.pathol.2017.08.002. Epub 2017 Oct 16. Pathology. 2017. PMID: 29050846 Review.
Point-of-care diagnostics for respiratory viral infections.
Basile K, Kok J, Dwyer DE. Basile K, et al. Expert Rev Mol Diagn. 2018 Jan;18(1):75-83. doi: 10.1080/14737159.2018.1419065. Epub 2017 Dec 26. Expert Rev Mol Diagn. 2018. PMID: 29251007 Free PMC article. Review.
The impact of influenza virus infection in pregnancy.
Somerville LK, Basile K, Dwyer DE, Kok J. Somerville LK, et al. Among authors: basile k. Future Microbiol. 2018 Feb;13:263-274. doi: 10.2217/fmb-2017-0096. Epub 2018 Jan 11. Future Microbiol. 2018. PMID: 29320882 Review.
An emergent clade of SARS-CoV-2 linked to returned travellers from Iran.
Eden JS, Rockett R, Carter I, Rahman H, de Ligt J, Hadfield J, Storey M, Ren X, Tulloch R, Basile K, Wells J, Byun R, Gilroy N, O'Sullivan MV, Sintchenko V, Chen SC, Maddocks S, Sorrell TC, Holmes EC, Dwyer DE, Kok J; 2019-nCoV Study Group. Eden JS, et al. Among authors: basile k. Virus Evol. 2020 Apr 10;6(1):veaa027. doi: 10.1093/ve/veaa027. eCollection 2020 Jan. Virus Evol. 2020. PMID: 32296544 Free PMC article.
Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling.
Rockett RJ, Arnott A, Lam C, Sadsad R, Timms V, Gray KA, Eden JS, Chang S, Gall M, Draper J, Sim EM, Bachmann NL, Carter I, Basile K, Byun R, O'Sullivan MV, Chen SC, Maddocks S, Sorrell TC, Dwyer DE, Holmes EC, Kok J, Prokopenko M, Sintchenko V. Rockett RJ, et al. Among authors: basile k. Nat Med. 2020 Sep;26(9):1398-1404. doi: 10.1038/s41591-020-1000-7. Epub 2020 Jul 9. Nat Med. 2020. PMID: 32647358
133 results