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Metabolomic, photoprotective, and photosynthetic acclimatory responses to post-flowering drought in sorghum.
Baker CR, Patel-Tupper D, Cole BJ, Ching LG, Dautermann O, Kelikian AC, Allison C, Pedraza J, Sievert J, Bilbao A, Lee JY, Kim YM, Kyle JE, Bloodsworth KJ, Paurus V, Hixson KK, Hutmacher R, Dahlberg J, Lemaux PG, Niyogi KK. Baker CR, et al. Among authors: kim ym. Plant Direct. 2023 Nov 13;7(11):e545. doi: 10.1002/pld3.545. eCollection 2023 Nov. Plant Direct. 2023. PMID: 37965197 Free PMC article.
MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses.
Nakayasu ES, Nicora CD, Sims AC, Burnum-Johnson KE, Kim YM, Kyle JE, Matzke MM, Shukla AK, Chu RK, Schepmoes AA, Jacobs JM, Baric RS, Webb-Robertson BJ, Smith RD, Metz TO. Nakayasu ES, et al. Among authors: kim ym. mSystems. 2016 May 10;1(3):e00043-16. doi: 10.1128/mSystems.00043-16. eCollection 2016 May-Jun. mSystems. 2016. PMID: 27822525 Free PMC article.
Comparing identified and statistically significant lipids and polar metabolites in 15-year old serum and dried blood spot samples for longitudinal studies.
Kyle JE, Casey CP, Stratton KG, Zink EM, Kim YM, Zheng X, Monroe ME, Weitz KK, Bloodsworth KJ, Orton DJ, Ibrahim YM, Moore RJ, Lee CG, Pedersen C, Orwoll E, Smith RD, Burnum-Johnson KE, Baker ES. Kyle JE, et al. Among authors: kim ym. Rapid Commun Mass Spectrom. 2017 Mar 15;31(5):447-456. doi: 10.1002/rcm.7808. Rapid Commun Mass Spectrom. 2017. PMID: 27958645 Free PMC article.
Lipidomics reveals dramatic lipid compositional changes in the maturing postnatal lung.
Dautel SE, Kyle JE, Clair G, Sontag RL, Weitz KK, Shukla AK, Nguyen SN, Kim YM, Zink EM, Luders T, Frevert CW, Gharib SA, Laskin J, Carson JP, Metz TO, Corley RA, Ansong C. Dautel SE, et al. Among authors: kim ym. Sci Rep. 2017 Feb 1;7:40555. doi: 10.1038/srep40555. Sci Rep. 2017. PMID: 28145528 Free PMC article.
Salinivirga fredricksonii gen. nov., sp. nov., a heterotrophic halophile isolated from a photosynthetic mat, a member of a novel lineage (Salinarimonadaceae fam. nov.) within the order Rhizobiales, and reclassification of the genus Salinarimonas Liu et al. 2010 into Salinarimonadaceae.
Cole JK, Morton BR, Cardamone HC, Lake HRR, Dohnalkova AC, Kim YM, Kyle JE, Maezato Y, Dana KL, Metz TO, Romine MF, Nelson WC, Lindemann SR. Cole JK, et al. Among authors: kim ym. Int J Syst Evol Microbiol. 2018 May;68(5):1591-1598. doi: 10.1099/ijsem.0.002715. Epub 2018 Mar 26. Int J Syst Evol Microbiol. 2018. PMID: 29580321
Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria.
Xu L, Naylor D, Dong Z, Simmons T, Pierroz G, Hixson KK, Kim YM, Zink EM, Engbrecht KM, Wang Y, Gao C, DeGraaf S, Madera MA, Sievert JA, Hollingsworth J, Birdseye D, Scheller HV, Hutmacher R, Dahlberg J, Jansson C, Taylor JW, Lemaux PG, Coleman-Derr D. Xu L, et al. Among authors: kim ym. Proc Natl Acad Sci U S A. 2018 May 1;115(18):E4284-E4293. doi: 10.1073/pnas.1717308115. Epub 2018 Apr 16. Proc Natl Acad Sci U S A. 2018. PMID: 29666229 Free PMC article.
The MPLEx Protocol for Multi-omic Analyses of Soil Samples.
Nicora CD, Burnum-Johnson KE, Nakayasu ES, Casey CP, White RA 3rd, Roy Chowdhury T, Kyle JE, Kim YM, Smith RD, Metz TO, Jansson JK, Baker ES. Nicora CD, et al. Among authors: kim ym. J Vis Exp. 2018 May 30;(135):57343. doi: 10.3791/57343. J Vis Exp. 2018. PMID: 29912205 Free PMC article.
Metabolite, Protein, and Lipid Extraction (MPLEx): A Method that Simultaneously Inactivates Middle East Respiratory Syndrome Coronavirus and Allows Analysis of Multiple Host Cell Components Following Infection.
Nicora CD, Sims AC, Bloodsworth KJ, Kim YM, Moore RJ, Kyle JE, Nakayasu ES, Metz TO. Nicora CD, et al. Among authors: kim ym. Methods Mol Biol. 2020;2099:173-194. doi: 10.1007/978-1-0716-0211-9_14. Methods Mol Biol. 2020. PMID: 31883096 Free PMC article.
3,988 results