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DREDge: robust motion correction for high-density extracellular recordings across species.
Windolf C, Yu H, Paulk AC, Meszéna D, Muñoz W, Boussard J, Hardstone R, Caprara I, Jamali M, Kfir Y, Xu D, Chung JE, Sellers KK, Ye Z, Shaker J, Lebedeva A, Raghavan M, Trautmann E, Melin M, Couto J, Garcia S, Coughlin B, Horváth C, Fiáth R, Ulbert I, Movshon JA, Shadlen MN, Churchland MM, Churchland AK, Steinmetz NA, Chang EF, Schweitzer JS, Williams ZM, Cash SS, Paninski L, Varol E. Windolf C, et al. Among authors: paninski l. bioRxiv [Preprint]. 2023 Oct 29:2023.10.24.563768. doi: 10.1101/2023.10.24.563768. bioRxiv. 2023. PMID: 37961359 Free PMC article. Preprint.
Lightning Pose: improved animal pose estimation via semi-supervised learning, Bayesian ensembling, and cloud-native open-source tools.
Biderman D, Whiteway MR, Hurwitz C, Greenspan N, Lee RS, Vishnubhotla A, Warren R, Pedraja F, Noone D, Schartner M, Huntenburg JM, Khanal A, Meijer GT, Noel JP, Pan-Vazquez A, Socha KZ, Urai AE; International Brain Laboratory; Cunningham JP, Sawtell NB, Paninski L. Biderman D, et al. Among authors: paninski l. bioRxiv [Preprint]. 2024 Apr 3:2023.04.28.538703. doi: 10.1101/2023.04.28.538703. bioRxiv. 2024. PMID: 37162966 Free PMC article. Preprint.
Bypassing spike sorting: Density-based decoding using spike localization from dense multielectrode probes.
Zhang Y, He T, Boussard J, Windolf C, Winter O, Trautmann E, Roth N, Barrell H, Churchland M, Steinmetz NA; International Brain Laboratory; Varol E, Hurwitz C, Paninski L. Zhang Y, et al. Among authors: paninski l. bioRxiv [Preprint]. 2023 Sep 22:2023.09.21.558869. doi: 10.1101/2023.09.21.558869. bioRxiv. 2023. PMID: 37790422 Free PMC article. Preprint.
Identifying Interpretable Latent Factors with Sparse Component Analysis.
Zimnik AJ, Cora Ames K, An X, Driscoll L, Lara AH, Russo AA, Susoy V, Cunningham JP, Paninski L, Churchland MM, Glaser JI. Zimnik AJ, et al. Among authors: paninski l. bioRxiv [Preprint]. 2024 Feb 6:2024.02.05.578988. doi: 10.1101/2024.02.05.578988. bioRxiv. 2024. PMID: 38370650 Free PMC article. Preprint.
An International Laboratory for Systems and Computational Neuroscience.
International Brain Laboratory. Electronic address: churchland@cshl.edu; International Brain Laboratory. International Brain Laboratory. Electronic address: churchland@cshl.edu, et al. Neuron. 2017 Dec 20;96(6):1213-1218. doi: 10.1016/j.neuron.2017.12.013. Neuron. 2017. PMID: 29268092 Free PMC article. Review.
The spatial and temporal structure of neural activity across the fly brain.
Schaffer ES, Mishra N, Whiteway MR, Li W, Vancura MB, Freedman J, Patel KB, Voleti V, Paninski L, Hillman EMC, Abbott LF, Axel R. Schaffer ES, et al. Among authors: paninski l. Nat Commun. 2023 Sep 11;14(1):5572. doi: 10.1038/s41467-023-41261-2. Nat Commun. 2023. PMID: 37696814 Free PMC article.
118 results