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AlphaFind: discover structure similarity across the proteome in AlphaFold DB.
Procházka D, Slanináková T, Olha J, Rošinec A, Grešová K, Jánošová M, Čillík J, Porubská J, Svobodová R, Dohnal V, Antol M. Procházka D, et al. Among authors: gresova k. Nucleic Acids Res. 2024 May 15:gkae397. doi: 10.1093/nar/gkae397. Online ahead of print. Nucleic Acids Res. 2024. PMID: 38747341
miRBind: A Deep Learning Method for miRNA Binding Classification.
Klimentová E, Hejret V, Krčmář J, Grešová K, Giassa IC, Alexiou P. Klimentová E, et al. Among authors: gresova k. Genes (Basel). 2022 Dec 9;13(12):2323. doi: 10.3390/genes13122323. Genes (Basel). 2022. PMID: 36553590 Free PMC article.