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OpenPBTA: The Open Pediatric Brain Tumor Atlas.
Cell Genom. 2023 May 31;3(7):100340. doi: 10.1016/j.xgen.2023.100340. eCollection 2023 Jul 12.
Cell Genom. 2023.
PMID: 37492101
Free PMC article.
Macrophages in SHH subgroup medulloblastoma display dynamic heterogeneity that varies with treatment modality.
Dang MT, Gonzalez MV, Gaonkar KS, Rathi KS, Young P, Arif S, Zhai L, Alam Z, Devalaraja S, Jerrick To TK, Folkert IW, Raman P, Rokita JL, Martinez D, Taroni JN, Shapiro JA, Greene CS, Savonen C, Mafra F, Hakonarson H, Curran T, Haldar M.
Dang MT, et al.
Cell Rep. 2023 Jun 27;42(6):112600. doi: 10.1016/j.celrep.2023.112600. Epub 2023 May 25.
Cell Rep. 2023.
PMID: 37235472
Free PMC article.
No abstract available.
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Evaluation of software impact designed for biomedical research: Are we measuring what's meaningful?
Afiaz A, Ivanov AA, Chamberlin J, Hanauer D, Savonen CL, Goldman MJ, Morgan M, Reich M, Getka A, Holmes A, Pati S, Knight D, Boutros PC, Bakas S, Caporaso JG, Del Fiol G, Hochheiser H, Haas B, Schloss PD, Eddy JA, Albrecht J, Fedorov A, Waldron L, Hoffman AM, Bradshaw RL, Leek JT, Wright C.
Afiaz A, et al. Among authors: savonen cl.
ArXiv [Preprint]. 2023 Jun 5:arXiv:2306.03255v1.
ArXiv. 2023.
PMID: 37332562
Free PMC article.
Preprint.
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Differentially expressed gene networks, biomarkers, long noncoding RNAs, and shared responses with cocaine identified in the midbrains of human opioid abusers.
Saad MH, Rumschlag M, Guerra MH, Savonen CL, Jaster AM, Olson PD, Alazizi A, Luca F, Pique-Regi R, Schmidt CJ, Bannon MJ.
Saad MH, et al. Among authors: savonen cl.
Sci Rep. 2019 Feb 7;9(1):1534. doi: 10.1038/s41598-018-38209-8.
Sci Rep. 2019.
PMID: 30733491
Free PMC article.
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Opioid Deaths: Trends, Biomarkers, and Potential Drug Interactions Revealed by Decision Tree Analyses.
Saad MH, Savonen CL, Rumschlag M, Todi SV, Schmidt CJ, Bannon MJ.
Saad MH, et al. Among authors: savonen cl.
Front Neurosci. 2018 Oct 23;12:728. doi: 10.3389/fnins.2018.00728. eCollection 2018.
Front Neurosci. 2018.
PMID: 30405330
Free PMC article.
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Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers.
Bannon MJ, Savonen CL, Jia H, Dachet F, Halter SD, Schmidt CJ, Lipovich L, Kapatos G.
Bannon MJ, et al. Among authors: savonen cl.
J Neurochem. 2015 Oct;135(1):50-9. doi: 10.1111/jnc.13255. Epub 2015 Sep 1.
J Neurochem. 2015.
PMID: 26222413
Free PMC article.
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Investigating the potential influence of cause of death and cocaine levels on the differential expression of genes associated with cocaine abuse.
Bannon MJ, Savonen CL, Hartley ZJ, Johnson MM, Schmidt CJ.
Bannon MJ, et al. Among authors: savonen cl.
PLoS One. 2015 Feb 6;10(2):e0117580. doi: 10.1371/journal.pone.0117580. eCollection 2015.
PLoS One. 2015.
PMID: 25658879
Free PMC article.
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