Chapagain PP - Search Results

1

Elucidating Residue-Level Determinants Affecting Dimerization of Ebola Virus Matrix Protein Using High-Throughput Site Saturation Mutagenesis and Biophysical Approaches.

Narkhede YB, Bhardwaj A, Motsa BB, Saxena R, Sharma T, Chapagain PP, Stahelin RV, Wiest O. Narkhede YB, et al. Among authors: chapagain pp. J Phys Chem B. 2023 Jul 27;127(29):6449-6461. doi: 10.1021/acs.jpcb.3c01759. Epub 2023 Jul 17. J Phys Chem B. 2023. PMID: 37458567

2

Molecular Dynamics Simulations of Conformational Conversions in Transformer Proteins.

Gerstman BS, Chapagain PP, Gc J, Steckmann T. Gerstman BS, et al. Among authors: chapagain pp. Methods Mol Biol. 2019;1958:297-311. doi: 10.1007/978-1-4939-9161-7_15. Methods Mol Biol. 2019. PMID: 30945225

3

The Integrin Binding Peptide, ATN-161, as a Novel Therapy for SARS-CoV-2 Infection.

Beddingfield B, Iwanaga N, Chapagain P, Zheng W, Roy CJ, Hu TY, Kolls J, Bix G. Beddingfield B, et al. bioRxiv [Preprint]. 2020 Jul 24:2020.06.15.153387. doi: 10.1101/2020.06.15.153387. bioRxiv. 2020. PMID: 32587959 Free PMC article. Updated. Preprint.

4

Characterization of ATPase Activity of P2RX2 Cation Channel.

Mittal R, Grati M, Sedlacek M, Yuan F, Chang Q, Yan D, Lin X, Kachar B, Farooq A, Chapagain P, Zhang Y, Liu XZ. Mittal R, et al. Front Physiol. 2016 May 24;7:186. doi: 10.3389/fphys.2016.00186. eCollection 2016. Front Physiol. 2016. PMID: 27252659 Free PMC article.

5

The trigger sequence in the GCN4 leucine zipper: alpha-helical propensity and multistate dynamics of folding and dimerization.

Chapagain PP, Liu Y, Gerstman BS. Chapagain PP, et al. J Chem Phys. 2008 Nov 7;129(17):175103. doi: 10.1063/1.3006421. J Chem Phys. 2008. PMID: 19045375

6

Pairwise amino acid secondary structural propensities.

Chemmama IE, Chapagain PP, Gerstman BS. Chemmama IE, et al. Among authors: chapagain pp. Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Apr;91(4):042709. doi: 10.1103/PhysRevE.91.042709. Epub 2015 Apr 15. Phys Rev E Stat Nonlin Soft Matter Phys. 2015. PMID: 25974529

7

A mathematical model of the dynamics of Salmonella Cerro infection in a US dairy herd.

Chapagain PP, van Kessel JS, Karns JS, Wolfgang DR, Hovingh E, Nelen KA, Schukken YH, Grohn YT. Chapagain PP, et al. Epidemiol Infect. 2008 Feb;136(2):263-72. doi: 10.1017/S0950268807008400. Epub 2007 Apr 20. Epidemiol Infect. 2008. PMID: 17445313 Free PMC article.

8

Lattice model simulation of interchain protein interactions and the folding dynamics and dimerization of the GCN4 Leucine zipper.

Liu Y, Chapagain PP, Parra JL, Gerstman BS. Liu Y, et al. Among authors: chapagain pp. J Chem Phys. 2008 Jan 28;128(4):045106. doi: 10.1063/1.2831513. J Chem Phys. 2008. PMID: 18248013

9

Cooperative structural transitions in amyloid-like aggregation.

Steckmann T, Bhandari YR, Chapagain PP, Gerstman BS. Steckmann T, et al. Among authors: chapagain pp. J Chem Phys. 2017 Apr 7;146(13):135103. doi: 10.1063/1.4979516. J Chem Phys. 2017. PMID: 28390382

10

Zika Virus: An Emerging Global Health Threat.

Mittal R, Nguyen D, Debs LH, Patel AP, Liu G, Jhaveri VM, S Kay SI, Mittal J, Bandstra ES, Younis RT, Chapagain P, Jayaweera DT, Liu XZ. Mittal R, et al. Front Cell Infect Microbiol. 2017 Dec 8;7:486. doi: 10.3389/fcimb.2017.00486. eCollection 2017. Front Cell Infect Microbiol. 2017. PMID: 29276699 Free PMC article. Review.

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