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Improvement of protein tertiary and quaternary structure predictions using the ReFOLD refinement method and the AlphaFold2 recycling process.
Bioinform Adv. 2023 Jun 14;3(1):vbad078. doi: 10.1093/bioadv/vbad078. eCollection 2023.
Bioinform Adv. 2023.
PMID: 37359722
Free PMC article.
ModFOLD8: accurate global and local quality estimates for 3D protein models.
McGuffin LJ, Aldowsari FMF, Alharbi SMA, Adiyaman R.
McGuffin LJ, et al. Among authors: alharbi sma.
Nucleic Acids Res. 2021 Jul 2;49(W1):W425-W430. doi: 10.1093/nar/gkab321.
Nucleic Acids Res. 2021.
PMID: 33963867
Free PMC article.
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Prediction of protein structures, functions and interactions using the IntFOLD7, MultiFOLD and ModFOLDdock servers.
McGuffin LJ, Edmunds NS, Genc AG, Alharbi SMA, Salehe BR, Adiyaman R.
McGuffin LJ, et al. Among authors: alharbi sma.
Nucleic Acids Res. 2023 Jul 5;51(W1):W274-W280. doi: 10.1093/nar/gkad297.
Nucleic Acids Res. 2023.
PMID: 37102670
Free PMC article.
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Estimation of model accuracy in CASP15 using the ModFOLDdock server.
Edmunds NS, Alharbi SMA, Genc AG, Adiyaman R, McGuffin LJ.
Edmunds NS, et al. Among authors: alharbi sma.
Proteins. 2023 Dec;91(12):1871-1878. doi: 10.1002/prot.26532. Epub 2023 Jun 14.
Proteins. 2023.
PMID: 37314190
Free PMC article.
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