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A solution to achieve sequencing from SARS-CoV-2 specimens with low viral loads: concatenation of reads from independent reactions.
Virol J. 2024 May 30;21(1):121. doi: 10.1186/s12985-024-02347-5.
Virol J. 2024.
PMID: 38816844
Free PMC article.
No emergence of resistance mutations in COVID-19 patients receiving nirmatrelvir/ritonavir.
Palomino-Cabrera R, Tejerina F, Molero-Salinas A, Veintimilla C, Catalán P, Ferris M, Osorio S, Alonso R, Muñoz P, de García de Viedma D, Pérez-Lago L; Gregorio Marañón Microbiology-ID COVID 19 Study Group.
Palomino-Cabrera R, et al.
J Med Virol. 2024 Jan;96(1):e29337. doi: 10.1002/jmv.29337.
J Med Virol. 2024.
PMID: 38149407
No abstract available.
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Systematic genomic analysis of SARS-CoV-2 co-infections throughout the pandemic and segregation of the strains involved.
Peñas-Utrilla D, Pérez-Lago L, Molero-Salinas A, Estévez A, Sanz A, Herranz M, Martínez-Laperche C, Andrés-Zayas C, Veintimilla C, Catalán P, Alonso R, Muñoz P, García de Viedma D; Gregorio Marañón Microbiology-ID COVID 19 Study Group.
Peñas-Utrilla D, et al.
Genome Med. 2023 Jul 24;15(1):57. doi: 10.1186/s13073-023-01198-z.
Genome Med. 2023.
PMID: 37488638
Free PMC article.
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A mutation responsible for impaired detection by the Xpert SARS-CoV-2 assay independently emerged in different lineages during the SARS-CoV-2 pandemic.
Peñas-Utrilla D, Sanz A, Catalán P, Veintimilla C, Alcalá L, Alonso R, Muñoz P, Pérez-Lago L, García de Viedma D; Gregorio Marañón Microbiology-ID COVID 19 Study Group.
Peñas-Utrilla D, et al.
BMC Microbiol. 2023 Jul 17;23(1):190. doi: 10.1186/s12866-023-02924-8.
BMC Microbiol. 2023.
PMID: 37460980
Free PMC article.
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Frequent Emergence of Resistance Mutations Following Complex Intra-Host Genomic Dynamics in SARS-CoV-2 Patients Receiving Sotrovimab.
Palomino-Cabrera R, Tejerina F, Molero-Salinas A, Ferris M, Veintimilla C, Catalán P, Rodríguez Macias G, Alonso R, Muñoz P, García de Viedma D, Pérez-Lago L; Gregorio Marañón Microbiology-ID COVID 19 Study Group.
Palomino-Cabrera R, et al.
Antimicrob Agents Chemother. 2023 Jul 18;67(7):e0026623. doi: 10.1128/aac.00266-23. Epub 2023 Jun 6.
Antimicrob Agents Chemother. 2023.
PMID: 37278655
Free PMC article.
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Early SARS-CoV-2 Reinfections Involving the Same or Different Genomic Lineages, Spain.
Rodríguez-Grande C, Estévez A, Palomino-Cabrera R, Molero-Salinas A, Peñas-Utrilla D, Herranz M, Sanz-Pérez A, Alcalá L, Veintimilla C, Catalán P, Martínez-Laperche C, Alonso R, Muñoz P, Pérez-Lago L, de Viedma DG; Gregorio Marañón Microbiology-ID COVID 19 Study Group.
Rodríguez-Grande C, et al. Among authors: palomino cabrera r.
Emerg Infect Dis. 2023 Jun;29(6):1154-1161. doi: 10.3201/eid2906.221696. Epub 2023 May 2.
Emerg Infect Dis. 2023.
PMID: 37130503
Free PMC article.
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Rapid Identification of Relevant Microbial Strains by Identifying Multiple Marker Single Nucleotide Polymorphisms via Amplicon Sequencing: Epidemic Monkeypox Virus as a Proof of Concept.
Buenestado-Serrano S, Herranz M, Palomino-Cabrera R, Rodríguez-Grande C, Peñas-Utrilla D, Molero-Salinas A, Veintimilla C, Catalán P, Alonso R, Muñoz P, Pérez-Lago L, García de Viedma D.
Buenestado-Serrano S, et al. Among authors: palomino cabrera r.
Microbiol Spectr. 2023 Feb 14;11(1):e0419622. doi: 10.1128/spectrum.04196-22. Epub 2023 Jan 5.
Microbiol Spectr. 2023.
PMID: 36602352
Free PMC article.
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