van Baarlen P - Search Results

1

Exploring the Interspecific Interactions and the Metabolome of the Soil Isolate Hylemonella gracilis.

Tyc O, Kulkarni P, Ossowicki A, Tracanna V, Medema MH, van Baarlen P, van IJcken WFJ, Verhoeven KJF, Garbeva P. Tyc O, et al. Among authors: van baarlen p. mSystems. 2023 Feb 23;8(1):e0057422. doi: 10.1128/msystems.00574-22. Epub 2022 Dec 20. mSystems. 2023. PMID: 36537799 Free PMC article.

2

Draft Genome Sequence of a Porcine Commensal, Rothia nasimurium, Encoding a Nonribosomal Peptide Synthetase Predicted To Produce the Ionophore Antibiotic Valinomycin.

Gaiser RA, Medema MH, Kleerebezem M, van Baarlen P, Wells JM. Gaiser RA, et al. Among authors: van baarlen p. Genome Announc. 2017 Jun 1;5(22):e00453-17. doi: 10.1128/genomeA.00453-17. Genome Announc. 2017. PMID: 28572325 Free PMC article.

3

Gene expression analysis of peripheral cells for subclassification of pediatric inflammatory bowel disease in remission.

van Lierop PP, Swagemakers SM, de Bie CI, Middendorp S, van Baarlen P, Samsom JN, van Ijcken WF, Escher JC, van der Spek PJ, Nieuwenhuis EE. van Lierop PP, et al. Among authors: van der spek pj, van ijcken wf, van baarlen p. PLoS One. 2013 Nov 18;8(11):e79549. doi: 10.1371/journal.pone.0079549. eCollection 2013. PLoS One. 2013. PMID: 24260248 Free PMC article.

4

Comparative genomics of Rothia species reveals diversity in novel biosynthetic gene clusters and ecological adaptation to different eukaryotic hosts and host niches.

Oliveira IMF, Ng DYK, van Baarlen P, Stegger M, Andersen PS, Wells JM. Oliveira IMF, et al. Among authors: van baarlen p. Microb Genom. 2022 Sep;8(9):mgen000854. doi: 10.1099/mgen.0.000854. Microb Genom. 2022. PMID: 36165601 Free PMC article.

5

Omics approaches to study host-microbiota interactions.

van Baarlen P, Kleerebezem M, Wells JM. van Baarlen P, et al. Curr Opin Microbiol. 2013 Jun;16(3):270-7. doi: 10.1016/j.mib.2013.07.001. Epub 2013 Jul 23. Curr Opin Microbiol. 2013. PMID: 23891019 Review.

6

Active Human and Porcine Serum Induce Competence for Genetic Transformation in the Emerging Zoonotic Pathogen Streptococcus suis.

Ferrando ML, Gussak A, Mentink S, Gutierrez MF, van Baarlen P, Wells JM. Ferrando ML, et al. Among authors: van baarlen p. Pathogens. 2021 Feb 3;10(2):156. doi: 10.3390/pathogens10020156. Pathogens. 2021. PMID: 33546136 Free PMC article.

7

Modulation of Mucosal Immune Response, Tolerance, and Proliferation in Mice Colonized by the Mucin-Degrader Akkermansia muciniphila.

Derrien M, Van Baarlen P, Hooiveld G, Norin E, Müller M, de Vos WM. Derrien M, et al. Among authors: van baarlen p. Front Microbiol. 2011 Aug 1;2:166. doi: 10.3389/fmicb.2011.00166. eCollection 2011. Front Microbiol. 2011. PMID: 21904534 Free PMC article.

8

Identification of Commensal Species Positively Correlated with Early Stress Responses to a Compromised Mucus Barrier.

Sovran B, Lu P, Loonen LM, Hugenholtz F, Belzer C, Stolte EH, Boekschoten MV, van Baarlen P, Smidt H, Kleerebezem M, de Vos P, Renes IB, Wells JM, Dekker J. Sovran B, et al. Among authors: van baarlen p. Inflamm Bowel Dis. 2016 Apr;22(4):826-40. doi: 10.1097/MIB.0000000000000688. Inflamm Bowel Dis. 2016. PMID: 26926038

9

Precision Genome Engineering in Streptococcus suis Based on a Broad-Host-Range Vector and CRISPR-Cas9 Technology.

Gussak A, Ferrando ML, Schrama M, van Baarlen P, Wells JM. Gussak A, et al. Among authors: van baarlen p. ACS Synth Biol. 2023 Sep 15;12(9):2546-2560. doi: 10.1021/acssynbio.3c00110. Epub 2023 Aug 21. ACS Synth Biol. 2023. PMID: 37602730 Free PMC article.

10

Transcriptomics in serum and culture medium reveal shared and differential gene regulation in pathogenic and commensal Streptococcus suis.

Fredriksen S, Ruijten SDE, Murray GGR, Juanpere-Borràs M, van Baarlen P, Boekhorst J, Wells JM. Fredriksen S, et al. Among authors: van baarlen p. Microb Genom. 2023 Apr;9(4):mgen000992. doi: 10.1099/mgen.0.000992. Microb Genom. 2023. PMID: 37103997 Free PMC article.

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