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Implications of the three-dimensional chromatin organization for genome evolution in a fungal plant pathogen.
Nat Commun. 2024 Feb 24;15(1):1701. doi: 10.1038/s41467-024-45884-x.
Nat Commun. 2024.
PMID: 38402218
Free PMC article.
Exploring the Interspecific Interactions and the Metabolome of the Soil Isolate Hylemonella gracilis.
Tyc O, Kulkarni P, Ossowicki A, Tracanna V, Medema MH, van Baarlen P, van IJcken WFJ, Verhoeven KJF, Garbeva P.
Tyc O, et al. Among authors: tracanna v.
mSystems. 2023 Feb 23;8(1):e0057422. doi: 10.1128/msystems.00574-22. Epub 2022 Dec 20.
mSystems. 2023.
PMID: 36537799
Free PMC article.
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Dissecting Disease-Suppressive Rhizosphere Microbiomes by Functional Amplicon Sequencing and 10× Metagenomics.
Tracanna V, Ossowicki A, Petrus MLC, Overduin S, Terlouw BR, Lund G, Robinson SL, Warris S, Schijlen EGWM, van Wezel GP, Raaijmakers JM, Garbeva P, Medema MH.
Tracanna V, et al.
mSystems. 2021 Jun 29;6(3):e0111620. doi: 10.1128/mSystems.01116-20. Epub 2021 Jun 8.
mSystems. 2021.
PMID: 34100635
Free PMC article.
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Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat.
Ossowicki A, Tracanna V, Petrus MLC, van Wezel G, Raaijmakers JM, Medema MH, Garbeva P.
Ossowicki A, et al. Among authors: tracanna v.
Proc Biol Sci. 2020 Feb 26;287(1921):20192527. doi: 10.1098/rspb.2019.2527. Epub 2020 Feb 19.
Proc Biol Sci. 2020.
PMID: 32070256
Free PMC article.
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Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome.
Carrión VJ, Perez-Jaramillo J, Cordovez V, Tracanna V, de Hollander M, Ruiz-Buck D, Mendes LW, van Ijcken WFJ, Gomez-Exposito R, Elsayed SS, Mohanraju P, Arifah A, van der Oost J, Paulson JN, Mendes R, van Wezel GP, Medema MH, Raaijmakers JM.
Carrión VJ, et al. Among authors: tracanna v.
Science. 2019 Nov 1;366(6465):606-612. doi: 10.1126/science.aaw9285.
Science. 2019.
PMID: 31672892
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MIBiG 2.0: a repository for biosynthetic gene clusters of known function.
Kautsar SA, Blin K, Shaw S, Navarro-Muñoz JC, Terlouw BR, van der Hooft JJJ, van Santen JA, Tracanna V, Suarez Duran HG, Pascal Andreu V, Selem-Mojica N, Alanjary M, Robinson SL, Lund G, Epstein SC, Sisto AC, Charkoudian LK, Collemare J, Linington RG, Weber T, Medema MH.
Kautsar SA, et al. Among authors: tracanna v.
Nucleic Acids Res. 2020 Jan 8;48(D1):D454-D458. doi: 10.1093/nar/gkz882.
Nucleic Acids Res. 2020.
PMID: 31612915
Free PMC article.
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BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs.
Meleshko D, Mohimani H, Tracanna V, Hajirasouliha I, Medema MH, Korobeynikov A, Pevzner PA.
Meleshko D, et al. Among authors: tracanna v.
Genome Res. 2019 Aug;29(8):1352-1362. doi: 10.1101/gr.243477.118. Epub 2019 Jun 3.
Genome Res. 2019.
PMID: 31160374
Free PMC article.
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Mining prokaryotes for antimicrobial compounds: from diversity to function.
Tracanna V, de Jong A, Medema MH, Kuipers OP.
Tracanna V, et al.
FEMS Microbiol Rev. 2017 May 1;41(3):417-429. doi: 10.1093/femsre/fux014.
FEMS Microbiol Rev. 2017.
PMID: 28402441
Review.
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