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mTOR Contributes to the Proteome Diversity through Transcriptome-Wide Alternative Splicing.
Int J Mol Sci. 2022 Oct 17;23(20):12416. doi: 10.3390/ijms232012416.
Int J Mol Sci. 2022.
PMID: 36293270
Free PMC article.
mTOR-regulated U2af1 tandem exon splicing specifies transcriptome features for translational control.
Chang JW, Yeh HS, Park M, Erber L, Sun J, Cheng S, Bui AM, Fahmi NA, Nasti R, Kuang R, Chen Y, Zhang W, Yong J.
Chang JW, et al. Among authors: fahmi na.
Nucleic Acids Res. 2019 Nov 4;47(19):10373-10387. doi: 10.1093/nar/gkz761.
Nucleic Acids Res. 2019.
PMID: 31504847
Free PMC article.
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AS-Quant: Detection and Visualization of Alternative Splicing Events with RNA-seq Data.
Fahmi NA, Nassereddeen H, Chang J, Park M, Yeh H, Sun J, Fan D, Yong J, Zhang W.
Fahmi NA, et al.
Int J Mol Sci. 2021 Apr 25;22(9):4468. doi: 10.3390/ijms22094468.
Int J Mol Sci. 2021.
PMID: 33922891
Free PMC article.
Item in Clipboard
Computational Methods to Study Human Transcript Variants in COVID-19 Infected Lung Cancer Cells.
Sun J, Fahmi NA, Nassereddeen H, Cheng S, Martinez I, Fan D, Yong J, Zhang W.
Sun J, et al. Among authors: fahmi na.
Int J Mol Sci. 2021 Sep 7;22(18):9684. doi: 10.3390/ijms22189684.
Int J Mol Sci. 2021.
PMID: 34575842
Free PMC article.
Item in Clipboard
APA-Scan: detection and visualization of 3'-UTR alternative polyadenylation with RNA-seq and 3'-end-seq data.
Fahmi NA, Ahmed KT, Chang JW, Nassereddeen H, Fan D, Yong J, Zhang W.
Fahmi NA, et al.
BMC Bioinformatics. 2022 Sep 28;23(Suppl 3):396. doi: 10.1186/s12859-022-04939-w.
BMC Bioinformatics. 2022.
PMID: 36171568
Free PMC article.
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53BP1-ACLY-SLBP-coordinated activation of replication-dependent histone biogenesis maintains genomic integrity.
Wu T, Jun S, Choi EJ, Sun J, Yang EB, Lee HS, Kim SY, Fahmi NA, Jiang Q, Zhang W, Yong J, Lee JH, You HJ.
Wu T, et al. Among authors: fahmi na.
Nucleic Acids Res. 2022 Feb 22;50(3):1465-1483. doi: 10.1093/nar/gkab1300.
Nucleic Acids Res. 2022.
PMID: 35037047
Free PMC article.
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Transcriptional programming drives Ibrutinib-resistance evolution in mantle cell lymphoma.
Zhao X, Wang MY, Jiang H, Lwin T, Park PM, Gao J, Meads MB, Ren Y, Li T, Sun J, Fahmi NA, Singh S, Sehgal L, Wang X, Silva AS, Sotomayor EM, Shain KH, Cleveland JL, Wang M, Zhang W, Qi J, Shah BD, Tao J.
Zhao X, et al. Among authors: fahmi na.
Cell Rep. 2021 Mar 16;34(11):108870. doi: 10.1016/j.celrep.2021.108870.
Cell Rep. 2021.
PMID: 33730585
Free PMC article.
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Investigating Chaperonin-Containing TCP-1 subunit 2 as an essential component of the chaperonin complex for tumorigenesis.
Showalter AE, Martini AC, Nierenberg D, Hosang K, Fahmi NA, Gopalan P, Khaled AS, Zhang W, Khaled AR.
Showalter AE, et al. Among authors: fahmi na.
Sci Rep. 2020 Jan 21;10(1):798. doi: 10.1038/s41598-020-57602-w.
Sci Rep. 2020.
PMID: 31964905
Free PMC article.
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