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Open and reproducible neuroimaging: From study inception to publication.
Niso G, Botvinik-Nezer R, Appelhoff S, De La Vega A, Esteban O, Etzel JA, Finc K, Ganz M, Gau R, Halchenko YO, Herholz P, Karakuzu A, Keator DB, Markiewicz CJ, Maumet C, Pernet CR, Pestilli F, Queder N, Schmitt T, Sójka W, Wagner AS, Whitaker KJ, Rieger JW. Niso G, et al. Among authors: pernet cr. Neuroimage. 2022 Nov;263:119623. doi: 10.1016/j.neuroimage.2022.119623. Epub 2022 Sep 12. Neuroimage. 2022. PMID: 36100172 Free PMC article. Review.
The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data.
Bannier E, Barker G, Borghesani V, Broeckx N, Clement P, Emblem KE, Ghosh S, Glerean E, Gorgolewski KJ, Havu M, Halchenko YO, Herholz P, Hespel A, Heunis S, Hu Y, Hu CP, Huijser D, de la Iglesia Vayá M, Jancalek R, Katsaros VK, Kieseler ML, Maumet C, Moreau CA, Mutsaerts HJ, Oostenveld R, Ozturk-Isik E, Pascual Leone Espinosa N, Pellman J, Pernet CR, Pizzini FB, Trbalić AŠ, Toussaint PJ, Visconti di Oleggio Castello M, Wang F, Wang C, Zhu H. Bannier E, et al. Among authors: pernet cr. Hum Brain Mapp. 2021 May;42(7):1945-1951. doi: 10.1002/hbm.25351. Epub 2021 Feb 1. Hum Brain Mapp. 2021. PMID: 33522661 Free PMC article.
Brainhack: Developing a culture of open, inclusive, community-driven neuroscience.
Gau R, Noble S, Heuer K, Bottenhorn KL, Bilgin IP, Yang YF, Huntenburg JM, Bayer JMM, Bethlehem RAI, Rhoads SA, Vogelbacher C, Borghesani V, Levitis E, Wang HT, Van Den Bossche S, Kobeleva X, Legarreta JH, Guay S, Atay SM, Varoquaux GP, Huijser DC, Sandström MS, Herholz P, Nastase SA, Badhwar A, Dumas G, Schwab S, Moia S, Dayan M, Bassil Y, Brooks PP, Mancini M, Shine JM, O'Connor D, Xie X, Poggiali D, Friedrich P, Heinsfeld AS, Riedl L, Toro R, Caballero-Gaudes C, Eklund A, Garner KG, Nolan CR, Demeter DV, Barrios FA, Merchant JS, McDevitt EA, Oostenveld R, Craddock RC, Rokem A, Doyle A, Ghosh SS, Nikolaidis A, Stanley OW, Uruñuela E; Brainhack Community. Gau R, et al. Neuron. 2021 Jun 2;109(11):1769-1775. doi: 10.1016/j.neuron.2021.04.001. Epub 2021 Apr 30. Neuron. 2021. PMID: 33932337 Free PMC article.
#EEGManyLabs: Investigating the replicability of influential EEG experiments.
Pavlov YG, Adamian N, Appelhoff S, Arvaneh M, Benwell CSY, Beste C, Bland AR, Bradford DE, Bublatzky F, Busch NA, Clayson PE, Cruse D, Czeszumski A, Dreber A, Dumas G, Ehinger B, Ganis G, He X, Hinojosa JA, Huber-Huber C, Inzlicht M, Jack BN, Johannesson M, Jones R, Kalenkovich E, Kaltwasser L, Karimi-Rouzbahani H, Keil A, König P, Kouara L, Kulke L, Ladouceur CD, Langer N, Liesefeld HR, Luque D, MacNamara A, Mudrik L, Muthuraman M, Neal LB, Nilsonne G, Niso G, Ocklenburg S, Oostenveld R, Pernet CR, Pourtois G, Ruzzoli M, Sass SM, Schaefer A, Senderecka M, Snyder JS, Tamnes CK, Tognoli E, van Vugt MK, Verona E, Vloeberghs R, Welke D, Wessel JR, Zakharov I, Mushtaq F. Pavlov YG, et al. Among authors: pernet cr. Cortex. 2021 Nov;144:213-229. doi: 10.1016/j.cortex.2021.03.013. Epub 2021 Apr 2. Cortex. 2021. PMID: 33965167 Free article.
PET-BIDS, an extension to the brain imaging data structure for positron emission tomography.
Norgaard M, Matheson GJ, Hansen HD, Thomas A, Searle G, Rizzo G, Veronese M, Giacomel A, Yaqub M, Tonietto M, Funck T, Gillman A, Boniface H, Routier A, Dalenberg JR, Betthauser T, Feingold F, Markiewicz CJ, Gorgolewski KJ, Blair RW, Appelhoff S, Gau R, Salo T, Niso G, Pernet C, Phillips C, Oostenveld R, Gallezot JD, Carson RE, Knudsen GM, Innis RB, Ganz M. Norgaard M, et al. Sci Data. 2022 Mar 2;9(1):65. doi: 10.1038/s41597-022-01164-1. Sci Data. 2022. PMID: 35236846 Free PMC article.
Reliability of ERP and single-trial analyses.
Gaspar CM, Rousselet GA, Pernet CR. Gaspar CM, et al. Among authors: pernet cr. Neuroimage. 2011 Sep 15;58(2):620-9. doi: 10.1016/j.neuroimage.2011.06.052. Epub 2011 Jun 25. Neuroimage. 2011. PMID: 21741482
86 results