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CCP4 Cloud for structure determination and project management in macromolecular crystallography.
Krissinel E, Lebedev AA, Uski V, Ballard CB, Keegan RM, Kovalevskiy O, Nicholls RA, Pannu NS, Skubák P, Berrisford J, Fando M, Lohkamp B, Wojdyr M, Simpkin AJ, Thomas JMH, Oliver C, Vonrhein C, Chojnowski G, Basle A, Purkiss A, Isupov MN, McNicholas S, Lowe E, Triviño J, Cowtan K, Agirre J, Rigden DJ, Uson I, Lamzin V, Tews I, Bricogne G, Leslie AGW, Brown DG. Krissinel E, et al. Among authors: thomas jmh. Acta Crystallogr D Struct Biol. 2022 Sep 1;78(Pt 9):1079-1089. doi: 10.1107/S2059798322007987. Epub 2022 Aug 30. Acta Crystallogr D Struct Biol. 2022. PMID: 36048148 Free PMC article.
ConKit: a python interface to contact predictions.
Simkovic F, Thomas JMH, Rigden DJ. Simkovic F, et al. Among authors: thomas jmh. Bioinformatics. 2017 Jul 15;33(14):2209-2211. doi: 10.1093/bioinformatics/btx148. Bioinformatics. 2017. PMID: 28369168 Free PMC article.
Recent developments in MrBUMP: better search-model preparation, graphical interaction with search models, and solution improvement and assessment.
Keegan RM, McNicholas SJ, Thomas JMH, Simpkin AJ, Simkovic F, Uski V, Ballard CC, Winn MD, Wilson KS, Rigden DJ. Keegan RM, et al. Among authors: thomas jmh. Acta Crystallogr D Struct Biol. 2018 Mar 1;74(Pt 3):167-182. doi: 10.1107/S2059798318003455. Epub 2018 Mar 6. Acta Crystallogr D Struct Biol. 2018. PMID: 29533225 Free PMC article.
18 results