Saez-Rodriguez J - Search Results

1

Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data.

Dimitrov D, Türei D, Garrido-Rodriguez M, Burmedi PL, Nagai JS, Boys C, Ramirez Flores RO, Kim H, Szalai B, Costa IG, Valdeolivas A, Dugourd A, Saez-Rodriguez J. Dimitrov D, et al. Nat Commun. 2022 Jun 9;13(1):3224. doi: 10.1038/s41467-022-30755-0. Nat Commun. 2022. PMID: 35680885 Free PMC article.

2

The orchestra of lipid-transfer proteins at the crossroads between metabolism and signaling.

Chiapparino A, Maeda K, Turei D, Saez-Rodriguez J, Gavin AC. Chiapparino A, et al. Prog Lipid Res. 2016 Jan;61:30-9. doi: 10.1016/j.plipres.2015.10.004. Epub 2015 Dec 1. Prog Lipid Res. 2016. PMID: 26658141 Free article. Review.

3

OmniPath: guidelines and gateway for literature-curated signaling pathway resources.

Türei D, Korcsmáros T, Saez-Rodriguez J. Türei D, et al. Nat Methods. 2016 Nov 29;13(12):966-967. doi: 10.1038/nmeth.4077. Nat Methods. 2016. PMID: 27898060 No abstract available.

4

Perturbation-response genes reveal signaling footprints in cancer gene expression.

Schubert M, Klinger B, Klünemann M, Sieber A, Uhlitz F, Sauer S, Garnett MJ, Blüthgen N, Saez-Rodriguez J. Schubert M, et al. Nat Commun. 2018 Jan 2;9(1):20. doi: 10.1038/s41467-017-02391-6. Nat Commun. 2018. PMID: 29295995 Free PMC article.

5

NADH Shuttling Couples Cytosolic Reductive Carboxylation of Glutamine with Glycolysis in Cells with Mitochondrial Dysfunction.

Gaude E, Schmidt C, Gammage PA, Dugourd A, Blacker T, Chew SP, Saez-Rodriguez J, O'Neill JS, Szabadkai G, Minczuk M, Frezza C. Gaude E, et al. Mol Cell. 2018 Feb 15;69(4):581-593.e7. doi: 10.1016/j.molcel.2018.01.034. Mol Cell. 2018. PMID: 29452638 Free PMC article.

6

A microfluidics platform for combinatorial drug screening on cancer biopsies.

Eduati F, Utharala R, Madhavan D, Neumann UP, Longerich T, Cramer T, Saez-Rodriguez J, Merten CA. Eduati F, et al. Nat Commun. 2018 Jun 22;9(1):2434. doi: 10.1038/s41467-018-04919-w. Nat Commun. 2018. PMID: 29934552 Free PMC article.

7

The germline genetic component of drug sensitivity in cancer cell lines.

Menden MP, Casale FP, Stephan J, Bignell GR, Iorio F, McDermott U, Garnett MJ, Saez-Rodriguez J, Stegle O. Menden MP, et al. Nat Commun. 2018 Aug 23;9(1):3385. doi: 10.1038/s41467-018-05811-3. Nat Commun. 2018. PMID: 30139972 Free PMC article.

8

Adipocyte-secreted BMP8b mediates adrenergic-induced remodeling of the neuro-vascular network in adipose tissue.

Pellegrinelli V, Peirce VJ, Howard L, Virtue S, Türei D, Senzacqua M, Frontini A, Dalley JW, Horton AR, Bidault G, Severi I, Whittle A, Rahmouni K, Saez-Rodriguez J, Cinti S, Davies AM, Vidal-Puig A. Pellegrinelli V, et al. Nat Commun. 2018 Nov 26;9(1):4974. doi: 10.1038/s41467-018-07453-x. Nat Commun. 2018. PMID: 30478315 Free PMC article.

9

Prioritization of cancer therapeutic targets using CRISPR-Cas9 screens.

Behan FM, Iorio F, Picco G, Gonçalves E, Beaver CM, Migliardi G, Santos R, Rao Y, Sassi F, Pinnelli M, Ansari R, Harper S, Jackson DA, McRae R, Pooley R, Wilkinson P, van der Meer D, Dow D, Buser-Doepner C, Bertotti A, Trusolino L, Stronach EA, Saez-Rodriguez J, Yusa K, Garnett MJ. Behan FM, et al. Nature. 2019 Apr;568(7753):511-516. doi: 10.1038/s41586-019-1103-9. Epub 2019 Apr 10. Nature. 2019. PMID: 30971826 Free article.

10

Functional linkage of gene fusions to cancer cell fitness assessed by pharmacological and CRISPR-Cas9 screening.

Picco G, Chen ED, Alonso LG, Behan FM, Gonçalves E, Bignell G, Matchan A, Fu B, Banerjee R, Anderson E, Butler A, Benes CH, McDermott U, Dow D, Iorio F, Stronach E, Yang F, Yusa K, Saez-Rodriguez J, Garnett MJ. Picco G, et al. Nat Commun. 2019 May 16;10(1):2198. doi: 10.1038/s41467-019-09940-1. Nat Commun. 2019. PMID: 31097696 Free PMC article.

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