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An online notebook resource for reproducible inference, analysis and publication of gene regulatory networks.
Ben Guebila M, Weighill D, Lopes-Ramos CM, Burkholz R, Pop RT, Palepu K, Shapoval M, Fagny M, Schlauch D, Glass K, Altenbuchinger M, Kuijjer ML, Platig J, Quackenbush J. Ben Guebila M, et al. Among authors: altenbuchinger m. Nat Methods. 2022 May;19(5):511-513. doi: 10.1038/s41592-022-01479-2. Nat Methods. 2022. PMID: 35459940 Free PMC article. No abstract available.
Gaussian and Mixed Graphical Models as (multi-)omics data analysis tools.
Altenbuchinger M, Weihs A, Quackenbush J, Grabe HJ, Zacharias HU. Altenbuchinger M, et al. Biochim Biophys Acta Gene Regul Mech. 2020 Jun;1863(6):194418. doi: 10.1016/j.bbagrm.2019.194418. Epub 2019 Oct 19. Biochim Biophys Acta Gene Regul Mech. 2020. PMID: 31639475 Free PMC article. Review.
Reference point insensitive molecular data analysis.
Altenbuchinger M, Rehberg T, Zacharias HU, Stämmler F, Dettmer K, Weber D, Hiergeist A, Gessner A, Holler E, Oefner PJ, Spang R. Altenbuchinger M, et al. Bioinformatics. 2017 Jan 15;33(2):219-226. doi: 10.1093/bioinformatics/btw598. Epub 2016 Sep 15. Bioinformatics. 2017. PMID: 27634945
BITES: balanced individual treatment effect for survival data.
Schrod S, Schäfer A, Solbrig S, Lohmayer R, Gronwald W, Oefner PJ, Beißbarth T, Spang R, Zacharias HU, Altenbuchinger M. Schrod S, et al. Among authors: altenbuchinger m. Bioinformatics. 2022 Jun 24;38(Suppl 1):i60-i67. doi: 10.1093/bioinformatics/btac221. Bioinformatics. 2022. PMID: 35758796 Free PMC article.
Scale-Invariant Biomarker Discovery in Urine and Plasma Metabolite Fingerprints.
Zacharias HU, Rehberg T, Mehrl S, Richtmann D, Wettig T, Oefner PJ, Spang R, Gronwald W, Altenbuchinger M. Zacharias HU, et al. Among authors: altenbuchinger m. J Proteome Res. 2017 Oct 6;16(10):3596-3605. doi: 10.1021/acs.jproteome.7b00325. Epub 2017 Sep 7. J Proteome Res. 2017. PMID: 28825821
A Novel Metabolic Signature To Predict the Requirement of Dialysis or Renal Transplantation in Patients with Chronic Kidney Disease.
Zacharias HU, Altenbuchinger M, Schultheiss UT, Samol C, Kotsis F, Poguntke I, Sekula P, Krumsiek J, Köttgen A, Spang R, Oefner PJ, Gronwald W. Zacharias HU, et al. Among authors: altenbuchinger m. J Proteome Res. 2019 Apr 5;18(4):1796-1805. doi: 10.1021/acs.jproteome.8b00983. Epub 2019 Mar 12. J Proteome Res. 2019. PMID: 30817158
A Predictive Model for Progression of CKD to Kidney Failure Based on Routine Laboratory Tests.
Zacharias HU, Altenbuchinger M, Schultheiss UT, Raffler J, Kotsis F, Ghasemi S, Ali I, Kollerits B, Metzger M, Steinbrenner I, Sekula P, Massy ZA, Combe C, Kalra PA, Kronenberg F, Stengel B, Eckardt KU, Köttgen A, Schmid M, Gronwald W, Oefner PJ; GCKD Investigators. Zacharias HU, et al. Among authors: altenbuchinger m. Am J Kidney Dis. 2022 Feb;79(2):217-230.e1. doi: 10.1053/j.ajkd.2021.05.018. Epub 2021 Jul 20. Am J Kidney Dis. 2022. PMID: 34298143
37 results