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vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration.
Dolin RH, Gothi SR, Boxwala A, Heale BSE, Husami A, Jones J, Khangar H, Londhe S, Naeymi-Rad F, Rao S, Rapchak B, Shalaby J, Suraj V, Xie N, Chamala S, Alterovitz G. Dolin RH, et al. Among authors: shalaby j. BMC Bioinformatics. 2021 Mar 2;22(1):104. doi: 10.1186/s12859-021-04039-1. BMC Bioinformatics. 2021. PMID: 33653260 Free PMC article.
Kaiser Permanente's Convergent Medical Terminology.
Dolin RH, Mattison JE, Cohn S, Campbell KE, Wiesenthal AM, Hochhalter B, LaBerge D, Barsoum R, Shalaby J, Abilla A, Clements RJ, Correia CM, Esteva D, Fedack JM, Goldberg BJ, Gopalarao S, Hafeza E, Hendler P, Hernandez E, Kamangar R, Kahn RA, Kurtovich G, Lazzareschi G, Lee MH, Lee T, Levy D, Lukoff JY, Lundberg C, Madden MP, Ngo TL, Nguyen BT, Patel NP, Resneck J, Ross DE, Schwarz KM, Selhorst CC, Snyder A, Umarji MI, Vilner M, Zer-Chen R, Zingo C. Dolin RH, et al. Among authors: shalaby j. Stud Health Technol Inform. 2004;107(Pt 1):346-50. Stud Health Technol Inform. 2004. PMID: 15360832
Lexical concept distribution reflects clinical practice.
Breydo E, Shubina M, Shalaby JW, Einbinder JS, Turchin A. Breydo E, et al. Among authors: shalaby jw. AMIA Annu Symp Proc. 2012;2012:61-6. Epub 2012 Nov 3. AMIA Annu Symp Proc. 2012. PMID: 23304273 Free PMC article.
PillHarmonics: An Orchestrated Pharmacogenetics Medication Clinical Decision Support Service.
Dolin RH, Shenvi E, Alvarez C, Barrows RC Jr, Boxwala A, Lee B, Nathanson BH, Kleyner Y, Hagemann R, Hongsermeier T, Kapusnik-Uner J, Lakdawala A, Shalaby J. Dolin RH, et al. Among authors: shalaby j. Appl Clin Inform. 2024 Mar;15(2):378-387. doi: 10.1055/a-2274-6763. Epub 2024 Feb 22. Appl Clin Inform. 2024. PMID: 38388174 Free PMC article.
Introducing HL7 FHIR Genomics Operations: a developer-friendly approach to genomics-EHR integration.
Dolin RH, Heale BSE, Alterovitz G, Gupta R, Aronson J, Boxwala A, Gothi SR, Haines D, Hermann A, Hongsermeier T, Husami A, Jones J, Naeymi-Rad F, Rapchak B, Ravishankar C, Shalaby J, Terry M, Xie N, Zhang P, Chamala S. Dolin RH, et al. Among authors: shalaby j. J Am Med Inform Assoc. 2023 Feb 16;30(3):485-493. doi: 10.1093/jamia/ocac246. J Am Med Inform Assoc. 2023. PMID: 36548217 Free PMC article.